RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 TMPRSS6Q8IU80 811 aa18.24■□□□□ 0.51
SMAD3-210ENST00000559092 MFN1Q8IWA4 741 aa18.24■□□□□ 0.51
SMAD3-210ENST00000559092 ATP6V0D2Q8N8Y2 350 aa18.24■□□□□ 0.51
SMAD3-210ENST00000559092 TTC17Q96AE7 1141 aa18.24■□□□□ 0.51
SMAD3-210ENST00000559092 LMLNQ96KR4 655 aa18.24■□□□□ 0.51
SMAD3-210ENST00000559092 PRICKLE1Q96MT3 831 aaPredicted RBP18.24■□□□□ 0.51
SMAD3-210ENST00000559092 NUCKS1Q9H1E3 243 aaKnown RBP18.24■□□□□ 0.51
SMAD3-210ENST00000559092 TMEM245Q9H330 911 aa18.24■□□□□ 0.51
SMAD3-210ENST00000559092 FAM204AQ9H8W3 233 aa18.24■□□□□ 0.51
SMAD3-210ENST00000559092 ITM2CQ9NQX7 267 aa18.24■□□□□ 0.51
SMAD3-210ENST00000559092 DDIT4Q9NX09 232 aa18.24■□□□□ 0.51
SMAD3-210ENST00000559092 MOCS2O96007 188 aaPredicted RBP18.23■□□□□ 0.51
SMAD3-210ENST00000559092 POLR2EP19388 210 aaKnown RBP18.23■□□□□ 0.51
SMAD3-210ENST00000559092 ABCB4P21439 1286 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 NOS2P35228 1153 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 MATKP42679 507 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 PTGER3P43115 390 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 RPS24P62847 133 aaKnown RBP18.23■□□□□ 0.51
SMAD3-210ENST00000559092 CAMK2GQ13555 558 aaPredicted RBP18.23■□□□□ 0.51
SMAD3-210ENST00000559092 STPG1Q5TH74 334 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 PEAR1Q5VY43 1037 aaPredicted RBP18.23■□□□□ 0.51
SMAD3-210ENST00000559092 LYSMD4Q5XG99 296 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 ZNF677Q86XU0 584 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 MSANTD4Q8NCY6 345 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 PIGKQ92643 395 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 C18orf8Q96DM3 657 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 MKRN2Q9H000 416 aaKnown RBP18.23■□□□□ 0.51
SMAD3-210ENST00000559092 GANQ9H2C0 597 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 SMOC1Q9H4F8 434 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 FBRSQ9HAH7 460 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 STIM2Q9P246 746 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 LIMA1Q9UHB6 759 aaKnown RBP18.23■□□□□ 0.51
SMAD3-210ENST00000559092 EVLQ9UI08 416 aaPredicted RBP18.23■□□□□ 0.51
SMAD3-210ENST00000559092 CYP8B1Q9UNU6 501 aa18.23■□□□□ 0.51
SMAD3-210ENST00000559092 DCDC2BA2VCK2 349 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 DAB1O75553 588 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 ASLP04424 464 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 EPHX1P07099 455 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 TACR2P21452 398 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 PRKCHP24723 683 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 OXTRP30559 389 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 CD70P32970 193 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 PITX1P78337 314 aaPredicted RBP18.22■□□□□ 0.51
SMAD3-210ENST00000559092 CDH18Q13634 790 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 PTPRNQ16849 979 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 FNDC3BQ53EP0 1204 aaKnown RBP18.22■□□□□ 0.51
SMAD3-210ENST00000559092 TTC39BQ5VTQ0 682 aaPredicted RBP18.22■□□□□ 0.51
SMAD3-210ENST00000559092 IL31Q6EBC2 164 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 KIAA1324Q6UXG2 1013 aaKnown RBP18.22■□□□□ 0.51
SMAD3-210ENST00000559092 RABEPKQ7Z6M1 372 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 ERICH1Q86X53 443 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 LGI2Q8N0V4 545 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 KDM1BQ8NB78 822 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 CEP76Q8TAP6 659 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 WFDC5Q8TCV5 224 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 PRCCQ92733 491 aaPredicted RBP18.22■□□□□ 0.51
SMAD3-210ENST00000559092 RNF34Q969K3 372 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 SIPA1Q96FS4 1042 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 ZNF419Q96HQ0 510 aaPredicted RBP18.22■□□□□ 0.51
SMAD3-210ENST00000559092 PRMT1Q99873 361 aaKnown RBP18.22■□□□□ 0.51
SMAD3-210ENST00000559092 NAT10Q9H0A0 1025 aaKnown RBP18.22■□□□□ 0.51
SMAD3-210ENST00000559092 RXFP3Q9NSD7 469 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 KIAA1522Q9P206 1035 aaPredicted RBP18.22■□□□□ 0.51
SMAD3-210ENST00000559092 USP36Q9P275 1121 aaKnown RBP18.22■□□□□ 0.51
SMAD3-210ENST00000559092 SUN2Q9UH99 717 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 XPO7Q9UIA9 1087 aaKnown RBP18.22■□□□□ 0.51
SMAD3-210ENST00000559092 PILRBQ9UKJ0 227 aa18.22■□□□□ 0.51
SMAD3-210ENST00000559092 F5H5T6 163 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 TM4SF5O14894 197 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 GRAP2O75791 330 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 LUC7L3O95232 432 aaKnown RBP18.21■□□□□ 0.51
SMAD3-210ENST00000559092 IGLV3-19P01714 112 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 CD6P30203 668 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 COPB1P53618 953 aaKnown RBP18.21■□□□□ 0.51
SMAD3-210ENST00000559092 COPAP53621 1224 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 ZNF33AQ06730 810 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 LMAN2Q12907 356 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 RAP1GAP2Q684P5 730 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 TCEAL6Q6IPX3 200 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 NOP9Q86U38 636 aaKnown RBP18.21■□□□□ 0.51
SMAD3-210ENST00000559092 CHSY1Q86X52 802 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 CFAP52Q8N1V2 620 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 CARNMT1Q8N4J0 409 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 OR2T3Q8NH03 318 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 EPS8L1Q8TE68 723 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 CYB5D2Q8WUJ1 264 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 FOXJ1Q92949 421 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 TCEAL3Q969E4 200 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 NT5C3BQ969T7 300 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 MYEOVQ96EZ4 313 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 SLC6A17Q9H1V8 727 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 FAM207AQ9NSI2 230 aaPredicted RBP18.21■□□□□ 0.51
SMAD3-210ENST00000559092 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.21■□□□□ 0.51
SMAD3-210ENST00000559092 SIK3Q9Y2K2 1263 aa18.21■□□□□ 0.51
SMAD3-210ENST00000559092 MYO18AQ92614 2054 aaKnown RBP18.21■□□□□ 0.51
SMAD3-210ENST00000559092 LNP1A1A4G5 178 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 LGALS16A8MUM7 142 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 NDUFS2O75306 463 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 MOCS3O95396 460 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 F9P00740 461 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms