RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PCDH19Q8TAB3 1148 aa18.68■□□□□ 0.58
CLPX-203ENST00000558958 NAP1L3Q99457 506 aaPredicted RBP18.68■□□□□ 0.58
CLPX-203ENST00000558958 CDH7Q9ULB5 785 aa18.68■□□□□ 0.58
CLPX-203ENST00000558958 NEU3Q9UQ49 428 aa18.68■□□□□ 0.58
CLPX-203ENST00000558958 SH3BP1Q9Y3L3 701 aa18.68■□□□□ 0.58
CLPX-203ENST00000558958 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.67■□□□□ 0.58
CLPX-203ENST00000558958 GOLGA6L7A0A1B0GV03 622 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 TCRBV7S2A1N4TA0A589 114 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 E2F8A0AVK6 867 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 E9PAM4 449 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 PAFAH1B1P43034 410 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 TPI1P60174 286 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 USP4Q13107 963 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 DPYSQ14117 519 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 LONRF2Q1L5Z9 754 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 FAM78AQ5JUQ0 283 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 ADGRF1Q5T601 910 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 KAZNQ674X7 775 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 RAP1GAP2Q684P5 730 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 RFX6Q8HWS3 928 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 PQLC3Q8N755 202 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 RIN3Q8TB24 985 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 SUSD6Q92537 303 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 SMARCD2Q92925 531 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 ASB16Q96NS5 453 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 NECTIN4Q96NY8 510 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 MAK16Q9BXY0 300 aaKnown RBP18.67■□□□□ 0.58
CLPX-203ENST00000558958 POMKQ9H5K3 350 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 UBE2ZQ9H832 354 aaPredicted RBP18.67■□□□□ 0.58
CLPX-203ENST00000558958 KIF9Q9HAQ2 790 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 ZNF510Q9Y2H8 683 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 HELZP42694 1942 aaKnown RBP18.67■□□□□ 0.58
CLPX-203ENST00000558958 XIRP2A4UGR9 3374 aa18.67■□□□□ 0.58
CLPX-203ENST00000558958 H3BQ06 376 aaPredicted RBP18.66■□□□□ 0.58
CLPX-203ENST00000558958 TJP3O95049 919 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 TACR2P21452 398 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 HOXC13P31276 330 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 SLC6A4P31645 630 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 ZNF77Q15935 545 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 FBXL22Q6P050 247 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 LRRC31Q6UY01 552 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 BBS12Q6ZW61 710 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 CHSY1Q86X52 802 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 CELF5Q8N6W0 485 aaKnown RBP18.66■□□□□ 0.58
CLPX-203ENST00000558958 TTC16Q8NEE8 873 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 TBC1D31Q96DN5 1066 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 DDX50Q9BQ39 737 aaKnown RBP18.66■□□□□ 0.58
CLPX-203ENST00000558958 PRDM16Q9HAZ2 1276 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 TRPV4Q9HBA0 871 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 ARHGEF4Q9NR80 690 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 PPARGC1AQ9UBK2 798 aaKnown RBP18.66■□□□□ 0.58
CLPX-203ENST00000558958 VANGL2Q9ULK5 521 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 USP15Q9Y4E8 981 aaPredicted RBP18.66■□□□□ 0.58
CLPX-203ENST00000558958 EYSQ5T1H1 3165 aa18.66■□□□□ 0.58
CLPX-203ENST00000558958 IGLV3-10A0A075B6K4 115 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 SCAMP3O14828 347 aaKnown RBP18.65■□□□□ 0.58
CLPX-203ENST00000558958 CST8O60676 142 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 AMPD1P23109 780 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 EPHB2P29323 1055 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 TFDP2Q14188 446 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 C5orf22Q49AR2 442 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 SLC9A4Q6AI14 798 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 ADAT2Q7Z6V5 191 aaKnown RBP18.65■□□□□ 0.58
CLPX-203ENST00000558958 FAM217AQ8IXS0 508 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 ZDHHC14Q8IZN3 488 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 MYADMQ96S97 322 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 STIM2Q9P246 746 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 DRGXA6NNA5 263 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 F5H5T6 163 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 GFRA2O00451 464 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 DAPK3O43293 454 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 ERCC2P18074 760 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 KCNA5P22460 613 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 CKAP4Q07065 602 aaKnown RBP18.65■□□□□ 0.58
CLPX-203ENST00000558958 SIX1Q15475 284 aaPredicted RBP18.65■□□□□ 0.58
CLPX-203ENST00000558958 SKIV2LQ15477 1246 aaKnown RBP18.65■□□□□ 0.58
CLPX-203ENST00000558958 RWDD4Q6NW29 188 aaKnown RBP18.65■□□□□ 0.58
CLPX-203ENST00000558958 RFWD3Q6PCD5 774 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 ZNF572Q7Z3I7 529 aaPredicted RBP18.65■□□□□ 0.58
CLPX-203ENST00000558958 BBS7Q8IWZ6 715 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 LGI2Q8N0V4 545 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 PLD5Q8N7P1 536 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.65■□□□□ 0.58
CLPX-203ENST00000558958 MAIP1Q8WWC4 291 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 IGSF8Q969P0 613 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 RSPRY1Q96DX4 576 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 MYEOVQ96EZ4 313 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 ETNK2Q9NVF9 386 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 NR2E1Q9Y466 385 aa18.65■□□□□ 0.58
CLPX-203ENST00000558958 ZFP37Q9Y6Q3 630 aaPredicted RBP18.65■□□□□ 0.58
CLPX-203ENST00000558958 NUP210Q8TEM1 1887 aaPredicted RBP18.64■□□□□ 0.58
CLPX-203ENST00000558958 C5orf42Q9H799 3197 aa18.64■□□□□ 0.58
CLPX-203ENST00000558958 GRXCR2A6NFK2 248 aa18.64■□□□□ 0.57
CLPX-203ENST00000558958 APOL1O14791 398 aa18.64■□□□□ 0.57
CLPX-203ENST00000558958 DCLK1O15075 740 aa18.64■□□□□ 0.57
CLPX-203ENST00000558958 FGF10O15520 208 aaPredicted RBP18.64■□□□□ 0.57
CLPX-203ENST00000558958 ZFXP17010 805 aaPredicted RBP18.64■□□□□ 0.57
CLPX-203ENST00000558958 VIPR2P41587 438 aa18.64■□□□□ 0.57
CLPX-203ENST00000558958 DYNLT1P63172 113 aa18.64■□□□□ 0.57
CLPX-203ENST00000558958 KIAA1958Q8N8K9 716 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms