RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 CTDSP1Q9GZU7 261 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 ALDH8A1Q9H2A2 487 aaPredicted RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 RANBP17Q9H2T7 1088 aaKnown RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 SAP30LQ9HAJ7 183 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 TRIM36Q9NQ86 728 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 INTS13Q9NVM9 706 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 BEX4Q9NWD9 120 aaPredicted RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 SLC25A10Q9UBX3 287 aaPredicted RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 RPS6KA6Q9UK32 745 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 ZFR2Q9UPR6 939 aaKnown RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 ENTPD2Q9Y5L3 495 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 NOX1Q9Y5S8 564 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 SNX8Q9Y5X2 465 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 FPGT-TNNI3KV9GXZ4 949 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 AGAP14A8MT82 685 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 GRXCR1A8MXD5 290 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 NPIPB6E9PJ23 425 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 SYN3O14994 580 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 VILLO15195 856 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 GPR42O15529 346 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 TGFB1I1O43294 461 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 FOXS1O43638 330 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 NCR1O76036 304 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 SCAF4O95104 1147 aaKnown RBP3.42□□□□□ -1.86
TRAV28-201ENST00000557548 RHOP08100 348 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 CYP3A4P08684 503 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 SPARCP09486 303 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 CLTBP09497 229 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 CSH1P0DML2 217 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 CSH2P0DML3 217 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 GLULP15104 373 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 MMP8P22894 467 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 ADRA1DP25100 572 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 PSMA4P25789 261 aaKnown RBP3.42□□□□□ -1.86
TRAV28-201ENST00000557548 NFKBIAP25963 317 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 LIPAP38571 399 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 IGHMBP2P38935 993 aaKnown RBP3.42□□□□□ -1.86
TRAV28-201ENST00000557548 HNRNPMP52272 730 aaKnown RBP eCLIP3.42□□□□□ -1.86
TRAV28-201ENST00000557548 VAV2P52735 878 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 TLE3Q04726 772 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 DEUP1Q05D60 604 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 CDK18Q07002 472 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 GOLGA8FQ08AF8 430 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 FAM187BQ17R55 369 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 SPDYE7PQ495Y7 208 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 ZNF766Q5HY98 468 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 WDR93Q6P2C0 686 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 ACSM6Q6P461 480 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 MTHFD1LQ6UB35 978 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 POLNQ7Z5Q5 900 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 DTX2Q86UW9 622 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 TMPRSS6Q8IU80 811 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 TMEM151BQ8IW70 566 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 RPAP2Q8IXW5 612 aaPredicted RBP3.42□□□□□ -1.86
TRAV28-201ENST00000557548 ZNF366Q8N895 744 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 B3GALNT2Q8NCR0 500 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 CXorf38Q8TB03 319 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 XAGE5Q8WWM1 108 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 LPIN2Q92539 896 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 KCNJ9Q92806 393 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 SH3KBP1Q96B97 665 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 PERPQ96FX8 193 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 RADILQ96JH8 1075 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 NR1H4Q96RI1 486 aaPredicted RBP3.42□□□□□ -1.86
TRAV28-201ENST00000557548 YME1L1Q96TA2 773 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 CD180Q99467 661 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 PIP5K1AQ99755 562 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 TXLNGYQ9BZA5 131 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 MUC13Q9H3R2 512 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 ZNF768Q9H5H4 540 aaKnown RBP3.42□□□□□ -1.86
TRAV28-201ENST00000557548 RXFP3Q9NSD7 469 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 THAP1Q9NVV9 213 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 PPP1R14DQ9NXH3 145 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 KCND2Q9NZV8 630 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 GIMAP2Q9UG22 337 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 CD207Q9UJ71 328 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 VPS4AQ9UN37 437 aa3.42□□□□□ -1.86
TRAV28-201ENST00000557548 COPG1Q9Y678 874 aaKnown RBP3.42□□□□□ -1.86
TRAV28-201ENST00000557548 GAGE10A6NGK3 116 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 NPIPB13A6NJU9 1138 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 MARCH11A6NNE9 402 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 NPIPB5A8MRT5 1133 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 AHRRA9YTQ3 701 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 NPIPB4C9JG80 1138 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 TMEM232C9JQI7 657 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 MUSKO15146 869 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 TRIM24O15164 1050 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 SLC16A3O15427 465 aaKnown RBP3.41□□□□□ -1.86
TRAV28-201ENST00000557548 DKC1O60832 514 aaKnown RBP eCLIP3.41□□□□□ -1.86
TRAV28-201ENST00000557548 PMPCBO75439 489 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 TSPAN9O75954 239 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 CCNDBP1O95273 360 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 PGM3O95394 542 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 ALDOAP04075 364 aaKnown RBP3.41□□□□□ -1.86
TRAV28-201ENST00000557548 URODP06132 367 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 ADRB2P07550 413 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 CREB1P16220 341 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 ZNF37AP17032 561 aaPredicted RBP3.41□□□□□ -1.86
TRAV28-201ENST00000557548 TM4SF1P30408 202 aa3.41□□□□□ -1.86
TRAV28-201ENST00000557548 AVPR2P30518 371 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms