RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 NOMO2Q5JPE7 1267 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 TTC22Q5TAA0 569 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 TSHZ3Q63HK5 1081 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 ABLIM2Q6H8Q1 611 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 LAYNQ6UX15 382 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 TTLL10Q6ZVT0 673 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 GALNT5Q7Z7M9 940 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 KIAA2013Q8IYS2 634 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 NSUN7Q8NE18 718 aaKnown RBP5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 ZFP28Q8NHY6 868 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 RAET1EQ8TD07 263 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 WDR60Q8WVS4 1066 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 CPT1BQ92523 772 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 PPP2R3CQ969Q6 453 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 PHACTR3Q96KR7 559 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 FAM227BQ96M60 508 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 TIGD1Q96MW7 591 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 SMOQ99835 787 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 FSD1Q9BTV5 496 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 ARHGAP39Q9C0H5 1083 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 ABHD16BQ9H3Z7 469 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 RNPEPQ9H4A4 650 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 ACAD9Q9H845 621 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 ANKEF1Q9NU02 776 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 ETAA1Q9NY74 926 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 DLL3Q9NYJ7 618 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 FAM30AQ9NZY2 134 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 PI4KBQ9UBF8 816 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 CNOT7Q9UIV1 285 aaKnown RBP5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 ADAM29Q9UKF5 820 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 TBX20Q9UMR3 447 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 HDAC5Q9UQL6 1122 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 CNPY2Q9Y2B0 182 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 AOX1Q06278 1338 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 CHD9Q3L8U1 2897 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 FRYLO94915 3013 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 MYO9BQ13459 2157 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 OR2W5A6NFC9 320 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 STX16-NPEPL1H3BU86 382 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 STX16O14662 325 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 SPTLC2O15270 562 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 DOK2O60496 412 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 PRSS23O95084 383 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 CNPP09543 421 aaKnown RBP5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 ATXN1LP0C7T5 689 aaKnown RBP5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 SERPINA4P29622 427 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 COPB2P35606 906 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 POLD2P49005 469 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 TOB1P50616 345 aaPredicted RBP5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 PRKAG1P54619 331 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 PRMT2P55345 433 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 DLG4P78352 724 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 PTCHD3Q3KNS1 767 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 ARMC3Q5W041 872 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 MCTP2Q6DN12 878 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 TAPT1Q6NXT6 567 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 CCDC129Q6ZRS4 1044 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 MED25Q71SY5 747 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 TTC30AQ86WT1 665 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 CFAP52Q8N1V2 620 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 KLHL36Q8N4N3 616 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 ADAMTS15Q8TE58 950 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 RNF125Q96EQ8 232 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 MASTLQ96GX5 879 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 TRIB1Q96RU8 372 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 TCF25Q9BQ70 676 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 KRTAP4-2Q9BYR5 136 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 LMAN2LQ9H0V9 348 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 C11orf49Q9H6J7 331 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 FSCN3Q9NQT6 498 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 NDUFAF4Q9P032 175 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 DNAJC16Q9Y2G8 782 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 MRPS17Q9Y2R5 130 aaKnown RBP5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 RAD54BQ9Y620 910 aa5.41□□□□□ -1.54
MTHFD1-216ENST00000557539 COL5A3P25940 1745 aaPredicted RBP5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 NRXN2Q9P2S2 1712 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 A0A1W2PRX2 142 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 PI4KAP2A4QPH2 592 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 EFCAB8A8MWE9 144 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 PRR5-ARHGAP8B1AHC4 643 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 AHCYL1O43865 530 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 NUAK1O60285 661 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 TRIM13O60858 407 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 TAF5LO75529 589 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 RPP40O75818 363 aaKnown RBP5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 FCER1AP12319 257 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 HGFP14210 728 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 CPA1P15085 419 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 LRPAP1P30533 357 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 HOXD12P35452 270 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 KCNC1P48547 511 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 PXNP49023 591 aaPredicted RBP5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 CCR9P51686 369 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 ZNF134P52741 427 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 PIGFQ07326 219 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 SLFN5Q08AF3 891 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 GALNT2Q10471 571 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 PDCLQ13371 301 aa5.4□□□□□ -1.54
MTHFD1-216ENST00000557539 RIN1Q13671 783 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms