RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 OTUD7AQ8TE49 926 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-221ENST00000556534 HMGB4Q8WW32 186 aa5.18□□□□□ -1.58
SCFD1-221ENST00000556534 PIGKQ92643 395 aa5.18□□□□□ -1.58
SCFD1-221ENST00000556534 SIGLEC11Q96RL6 698 aa5.18□□□□□ -1.58
SCFD1-221ENST00000556534 DDX23Q9BUQ8 820 aaKnown RBP5.18□□□□□ -1.58
SCFD1-221ENST00000556534 TRIM2Q9C040 744 aa5.18□□□□□ -1.58
SCFD1-221ENST00000556534 PRDM16Q9HAZ2 1276 aa5.18□□□□□ -1.58
SCFD1-221ENST00000556534 C19orf53Q9UNZ5 99 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-221ENST00000556534 EMSYQ7Z589 1322 aa5.18□□□□□ -1.58
SCFD1-221ENST00000556534 CYP3A7-CYP3A51PA0A087WV96 503 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 IPO5O00410 1097 aaKnown RBP5.17□□□□□ -1.58
SCFD1-221ENST00000556534 CNOT3O75175 753 aaKnown RBP5.17□□□□□ -1.58
SCFD1-221ENST00000556534 SGPL1O95470 568 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 CYP3A7P24462 503 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 HOXD9P28356 352 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-221ENST00000556534 GRK5P34947 590 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 RNASELQ05823 741 aaKnown RBP5.17□□□□□ -1.58
SCFD1-221ENST00000556534 GRAMD1BQ3KR37 738 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 GALNTL6Q49A17 601 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 SLC9C1Q4G0N8 1177 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 DEF8Q6ZN54 512 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 UBE2Q1Q7Z7E8 422 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 MYCT1Q8N699 235 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 SRFBP1Q8NEF9 429 aaKnown RBP5.17□□□□□ -1.58
SCFD1-221ENST00000556534 CLEC4CQ8WTT0 213 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 COQ8BQ96D53 544 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 ZNF778Q96MU6 729 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 SORBS1Q9BX66 1292 aaKnown RBP5.17□□□□□ -1.58
SCFD1-221ENST00000556534 TMEM120AQ9BXJ8 343 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 ELAC1Q9H777 363 aaKnown RBP5.17□□□□□ -1.58
SCFD1-221ENST00000556534 ERVK-5Q9HDB9 667 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 SLC12A4Q9UP95 1085 aa5.17□□□□□ -1.58
SCFD1-221ENST00000556534 EFCAB8A8MWE9 144 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 INO80B-WBP1J3KQ70 363 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 HEXIM1O94992 359 aaKnown RBP5.16□□□□□ -1.58
SCFD1-221ENST00000556534 ENO1P06733 434 aaKnown RBP5.16□□□□□ -1.58
SCFD1-221ENST00000556534 CYP21A2P08686 494 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 CTSAP10619 480 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 AKR1A1P14550 325 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 RPS13P62277 151 aaKnown RBP5.16□□□□□ -1.58
SCFD1-221ENST00000556534 SHC2P98077 582 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 ETFDHQ16134 617 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 DHRS13Q6UX07 377 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 RTL10Q7L3V2 364 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 UEVLDQ8IX04 471 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 OR52N4Q8NGI2 321 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 SLC2A12Q8TD20 617 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 PIGOQ8TEQ8 1089 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 TRAPPC12Q8WVT3 735 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 CUL5Q93034 780 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 RPL36ALQ969Q0 106 aaKnown RBP5.16□□□□□ -1.58
SCFD1-221ENST00000556534 LTV1Q96GA3 475 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-221ENST00000556534 ABHD14AQ9BUJ0 271 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 ABHD16BQ9H3Z7 469 aa5.16□□□□□ -1.58
SCFD1-221ENST00000556534 MOV10Q9HCE1 1003 aaKnown RBP5.16□□□□□ -1.58
SCFD1-221ENST00000556534 LIN7CQ9NUP9 197 aaKnown RBP5.16□□□□□ -1.58
SCFD1-221ENST00000556534 SRP68Q9UHB9 627 aaKnown RBP5.16□□□□□ -1.58
SCFD1-221ENST00000556534 COPG1Q9Y678 874 aaKnown RBP5.16□□□□□ -1.58
SCFD1-221ENST00000556534 SETD1BQ9UPS6 1966 aaKnown RBP5.16□□□□□ -1.58
SCFD1-221ENST00000556534 TBC1D3DA0A087WVF3 549 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TBC1D3IA0A087WXS9 549 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TBC1D3EA0A087X179 549 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TBC1D3KA0A087X1G2 549 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TBC1D3BA6NDS4 549 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TBC1D3FA6NER0 549 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-221ENST00000556534 AGAP5A6NIR3 686 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TBC1D3LB9A6J9 549 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 H0Y3Z8 333 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TLR2O60603 784 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 NBNO60934 754 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TBC1D3HP0C7X1 549 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 CDK4P11802 303 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TFEBP19484 476 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TGM2P21980 687 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 GRK6P43250 576 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 ZNF81P51508 661 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 SLC12A2P55011 1212 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 B4GALNT1Q00973 533 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 ID2Q02363 134 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 ZNF91Q05481 1191 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 KRTAP1-1Q07627 177 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 PGM5Q15124 567 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TRIP6Q15654 476 aaKnown RBP5.15□□□□□ -1.59
SCFD1-221ENST00000556534 PDCD2Q16342 344 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-221ENST00000556534 ANXA2RQ3ZCQ2 193 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 EARS2Q5JPH6 523 aaKnown RBP5.15□□□□□ -1.59
SCFD1-221ENST00000556534 ZNF569Q5MCW4 686 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TBC1D3GQ6DHY5 549 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TBC1D3CQ6IPX1 549 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TBC1D3Q8IZP1 549 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-221ENST00000556534 NKAPQ8N5F7 415 aaKnown RBP5.15□□□□□ -1.59
SCFD1-221ENST00000556534 ADPRHL1Q8NDY3 354 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 PRSS3P2Q8NHM4 247 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 BCAS4Q8TDM0 211 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 ATP2A3Q93084 1043 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 ZNF347Q96SE7 839 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 HTATIP2Q9BUP3 242 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 SCNM1Q9BWG6 230 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TMEM184CQ9NVA4 438 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 TRNAU1APQ9NX07 287 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms