RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 MRPL45Q9BRJ2 306 aaKnown RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 FUT8Q9BYC5 575 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 DDX47Q9H0S4 455 aaKnown RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 RAB17Q9H0T7 212 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 CXCL16Q9H2A7 254 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 VIPAS39Q9H9C1 493 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 EPB41L5Q9HCM4 733 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 GDF3Q9NR23 364 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 TOR4AQ9NXH8 423 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 DDX56Q9NY93 547 aaKnown RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 UBP1Q9NZI7 540 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 HMGXB4Q9UGU5 601 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 FEZ2Q9UHY8 353 aaPredicted RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 RASAL2Q9UJF2 1139 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 TSPAN16Q9UKR8 245 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 PADI3Q9ULW8 664 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 L1RE1Q9UN81 338 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 UTP11Q9Y3A2 253 aaKnown RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 NR2E1Q9Y466 385 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 LRBAP50851 2863 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 ITPR2Q14571 2701 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 CACNA1IQ9P0X4 2223 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 TCRBV5S1A1TA0A578 114 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 PODXLO00592 558 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 PPEF2O14830 753 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 FSCN2O14926 492 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 RAD51CO43502 376 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 RNF8O76064 485 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 PF4P02776 101 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 GLI1P08151 1106 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 GHRP10912 638 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 WARSP23381 471 aaKnown RBP7.11□□□□□ -1.27
SLIRP-204ENST00000555890 PSMA2P25787 234 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 CD52P31358 61 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 GBP1P32455 592 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 GPD2P43304 727 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 MARCKSL1P49006 195 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 SLC8A3P57103 927 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 LILRA4P59901 499 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 DR1Q01658 176 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 PDCLQ13371 301 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 CCINQ13939 588 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 CASP8Q14790 479 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 SOWAHAQ2M3V2 549 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 PTPN20Q4JDL3 420 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 AASDHQ4L235 1098 aaPredicted RBP7.11□□□□□ -1.27
SLIRP-204ENST00000555890 PLEKHG4Q58EX7 1191 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 ZFYVE27Q5T4F4 411 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 ZNF618Q5T7W0 954 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 CYP4A22Q5TCH4 519 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 OR6B2Q6IFH4 312 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 LLGL2Q6P1M3 1020 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 ADGRD2Q7Z7M1 963 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 ZDHHC17Q8IUH5 632 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 CCNJLQ8IV13 435 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 ADGRF2Q8IZF7 708 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 TMEM86AQ8N2M4 240 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 PGBD3Q8N328 593 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 TMEM130Q8N3G9 435 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 NIPA2Q8N8Q9 360 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 GOLM1Q8NBJ4 401 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 ZBTB44Q8NCP5 570 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 DBF4BQ8NFT6 615 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 MICAL1Q8TDZ2 1067 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 FNIP1Q8TF40 1166 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 AENQ8WTP8 325 aaKnown RBP7.11□□□□□ -1.27
SLIRP-204ENST00000555890 HDAC7Q8WUI4 952 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 MAGOHBQ96A72 148 aaKnown RBP7.11□□□□□ -1.27
SLIRP-204ENST00000555890 MCRS1Q96EZ8 462 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 MCEEQ96PE7 176 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 PPP1R10Q96QC0 940 aaKnown RBP7.11□□□□□ -1.27
SLIRP-204ENST00000555890 GAD1Q99259 594 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 NCAPGQ9BPX3 1015 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 ZNF768Q9H5H4 540 aaKnown RBP7.11□□□□□ -1.27
SLIRP-204ENST00000555890 AGO3Q9H9G7 860 aaKnown RBP7.11□□□□□ -1.27
SLIRP-204ENST00000555890 ST7Q9NRC1 585 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 FAM114A2Q9NRY5 505 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 ZSCAN32Q9NX65 697 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 IL17BQ9UHF5 180 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 FBXO4Q9UKT5 387 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 FBXL21Q9UKT6 434 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 TLR6Q9Y2C9 796 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 FANCMQ8IYD8 2048 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 DOPEY2Q9Y3R5 2298 aa7.11□□□□□ -1.27
SLIRP-204ENST00000555890 A0A0U1RQF3 1178 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 ARHGEF37A1IGU5 675 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 ARL5CA6NH57 179 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 CYB561D2O14569 222 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 PTGESO14684 152 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 MAP2K7O14733 419 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 CAPN5O15484 640 aaPredicted RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 MMP20O60882 483 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 LILRB5O75023 590 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 LUC7L3O95232 432 aaKnown RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 PARNO95453 639 aaKnown RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 KRT1P04264 644 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 ERBB2P04626 1255 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 KRT7P08729 469 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 PDGFRBP09619 1106 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 BMP2P12643 396 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms