RNA–Protein interactions for RNA: ENST00000555137.5

HNRNPC-216, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-216ENST00000555137 PRICKLE1Q96MT3 831 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-216ENST00000555137 OSGEPQ9NPF4 335 aa10.05□□□□□ -0.8
HNRNPC-216ENST00000555137 SCUBE2Q9NQ36 999 aa10.05□□□□□ -0.8
HNRNPC-216ENST00000555137 RAB20Q9NX57 234 aa10.05□□□□□ -0.8
HNRNPC-216ENST00000555137 HBS1LQ9Y450 684 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-216ENST00000555137 MGAQ8IWI9 3026 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 FAM237AA0A1B0GTK4 181 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 CBX4O00257 560 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 O00370 1275 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 TNFSF14O43557 240 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 PCDHGA12O60330 932 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 IGLV3-27P01718 113 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 DLDP09622 509 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 CD27P26842 260 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 GRK6P43250 576 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 SYKP43405 635 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 CCT8P50990 548 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 BCAT1P54687 386 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 E2F5Q15329 346 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 SMAD1Q15797 465 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 PKDCCQ504Y2 493 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 FAM133BQ5BKY9 247 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 NADSYN1Q6IA69 706 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 DHRS13Q6UX07 377 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 AHI1Q8N157 1196 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 TTC39CQ8N584 583 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 UBR7Q8N806 425 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 CCDC150Q8NCX0 1101 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 UBA3Q8TBC4 463 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 TMA16Q96EY4 203 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 FAXDC2Q96IV6 333 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 SLC6A18Q96N87 628 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 ZSWIM1Q9BR11 485 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 BTBD1Q9H0C5 482 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 GOLPH3LQ9H4A5 285 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 EBF2Q9HAK2 575 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 LRRC4Q9HBW1 653 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 OLA1Q9NTK5 396 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 USP25Q9UHP3 1055 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 INTS6Q9UL03 887 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 PLA2G4CQ9UP65 541 aa10.04□□□□□ -0.8
HNRNPC-216ENST00000555137 A0A087WV48 116 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 C10orf142B7Z368 130 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 PIK3R2O00459 728 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 WNT9AO14904 365 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 TBL1XO60907 577 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 LATS1O95835 1130 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 CALCAP01258 141 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 DNTTP04053 509 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 WNT1P04628 370 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 CD19P15391 556 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 RPL13P26373 211 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 RGS7P49802 495 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 DAOAP59103 153 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 ZBTB16Q05516 673 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 BST2Q10589 180 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 CUL2Q13617 745 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 KCNJ12Q14500 433 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 SHBQ15464 509 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 TEAD4Q15561 434 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 EDRF1Q3B7T1 1238 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 SGO2Q562F6 1265 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 PIK3R6Q5UE93 754 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 ZNF776Q68DI1 518 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 KIAA0895LQ68EN5 471 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 TENM4Q6N022 2769 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 MSANTD2Q6P1R3 559 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 MMS22LQ6ZRQ5 1243 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 GATAD2AQ86YP4 633 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 SIX6OS1Q8N1H7 587 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 CLEC4CQ8WTT0 213 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 RNF139Q8WU17 664 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 TFAP2BQ92481 460 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 MRGPRX3Q96LB0 322 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 IPO9Q96P70 1041 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 DNAI2Q9GZS0 605 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 RSPH9Q9H1X1 276 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 PABPC3Q9H361 631 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 FBRSQ9HAH7 460 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 COQ4Q9Y3A0 265 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 ZNF462Q96JM2 2506 aa10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 ARID1BQ8NFD5 2236 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 COL5A1P20908 1838 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-216ENST00000555137 NYNRINQ9P2P1 1898 aaKnown RBP10.02□□□□□ -0.8
HNRNPC-216ENST00000555137 A0A1B0GTQ1 180 aa10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 A0A1W2PQ27 194 aa10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 A0A1W2PQ64 194 aa10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 GOLGA6L4A6NEF3 574 aa10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 FAM47DPA6NHR8 397 aa10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 VILLO15195 856 aa10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 PAPSS1O43252 624 aaPredicted RBP10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 SIN3BO75182 1162 aa10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 LCP1P13796 627 aa10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 POLR2EP19388 210 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 CSKP41240 450 aa10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 CTSOP43234 321 aaPredicted RBP10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 GALCP54803 685 aa10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 SLC8A3P57103 927 aa10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 ZNF445P59923 1031 aa10.02□□□□□ -0.81
HNRNPC-216ENST00000555137 RPS24P62847 133 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms