RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SLC45A4Q5BKX6 768 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 EDEM1Q92611 657 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 RUBCNQ92622 972 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 DNAJC16Q9Y2G8 782 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 A0A087WZ62 844 aa7.02□□□□□ -1.28
SYNE2-216ENST00000555002 UBE2Q2LH0YL09 131 aa7.02□□□□□ -1.28
SYNE2-216ENST00000555002 FARP2O94887 1054 aaPredicted RBP7.02□□□□□ -1.28
SYNE2-216ENST00000555002 SNX4O95219 450 aa7.02□□□□□ -1.28
SYNE2-216ENST00000555002 PGM3O95394 542 aa7.02□□□□□ -1.28
SYNE2-216ENST00000555002 RLN1P04808 185 aa7.02□□□□□ -1.28
SYNE2-216ENST00000555002 DBIP07108 87 aaKnown RBP7.02□□□□□ -1.28
SYNE2-216ENST00000555002 ADIGQ0VDE8 80 aa7.02□□□□□ -1.28
SYNE2-216ENST00000555002 TERF2Q15554 542 aa7.02□□□□□ -1.28
SYNE2-216ENST00000555002 ZNF605Q86T29 641 aa7.02□□□□□ -1.28
SYNE2-216ENST00000555002 FNDC5Q8NAU1 212 aa7.02□□□□□ -1.28
SYNE2-216ENST00000555002 EEF1AKMT1Q8WVE0 214 aa7.02□□□□□ -1.28
SYNE2-216ENST00000555002 MCRS1Q96EZ8 462 aa7.02□□□□□ -1.28
SYNE2-216ENST00000555002 MID1IP1Q9NPA3 183 aa7.02□□□□□ -1.28
SYNE2-216ENST00000555002 TBC1D3BA6NDS4 549 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 CCDC154A6NI56 674 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF879B4DU55 563 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 TP73O15350 636 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 FCGR1AP12314 374 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 MDH1P40925 334 aaKnown RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 ZSWIM2Q8NEG5 633 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 BRINP2Q9C0B6 783 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 VPS33BQ9H267 617 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 PIH1D1Q9NWS0 290 aaKnown RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 NARFQ9UHQ1 456 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 GALCP54803 685 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 ABATP80404 500 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 GPR156Q8NFN8 814 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 RELTQ969Z4 430 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 TUBE1Q9UJT0 475 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 PTGES3LE9PB15 166 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 H7C0S8 307 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 CDH16O75309 829 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 TPP2P29144 1249 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 KCNT1Q5JUK3 1230 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 POMZP3Q6PJE2 187 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 MSANTD1Q6ZTZ1 278 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 GLT6D1Q7Z4J2 308 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 SLFN11Q7Z7L1 901 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 PACS2Q86VP3 889 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 TIPINQ9BVW5 301 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 EPB41L4BQ9H329 900 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 GPAMQ9HCL2 828 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 EPB41L4AQ9HCS5 686 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 ZCCHC17Q9NP64 241 aaKnown RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF839A8K0R7 811 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 KCNH1O95259 989 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 RENBPP51606 427 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 DNAJC3Q13217 504 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 USP41Q3LFD5 358 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 TCHHL1Q5QJ38 904 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 TBCELQ5QJ74 424 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 TAF2Q6P1X5 1199 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 LRIG3Q6UXM1 1119 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 FAM172AQ8WUF8 416 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 KCNN2Q9H2S1 579 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF214Q9UL59 606 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 ADGRA3Q8IWK6 1321 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 SEC22BO75396 215 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 EPN2O95208 641 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 TBX4P57082 545 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 RAB2AP61019 212 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 BTG3Q14201 252 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 RABL6Q3YEC7 729 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 PLEKHH3Q7Z736 793 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 CAMK1DQ8IU85 385 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 APOL4Q9BPW4 351 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 CEP44Q9C0F1 390 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 SYNMO15061 1565 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 STX16-NPEPL1H3BU86 382 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 STX16O14662 325 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 PHGDHO43175 533 aaKnown RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 NDUFB10O96000 172 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 LYNP07948 512 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 NFKB1P19838 968 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 RPA3P35244 121 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 CASP4P49662 377 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 CACNA2D1P54289 1103 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 CASP9P55211 416 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 EPHA7Q15375 998 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 CRY1Q16526 586 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 FBXL19Q6PCT2 694 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 GJB7Q6PEY0 223 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 EPS8L3Q8TE67 593 aaKnown RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 KLHL32Q96NJ5 620 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 TMEM8AQ9HCN3 771 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 RBM12Q9NTZ6 932 aaKnown RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 HBP1O60381 514 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 TLX1P31314 330 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 CELF1Q92879 486 aaKnown RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 DCUN1D5Q9BTE7 237 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 CPA4Q9UI42 421 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 FAM50BQ9Y247 325 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 DRG1Q9Y295 367 aaKnown RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 USP27XA6NNY8 438 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 RPS6KA4O75676 772 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms