RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CLEC14AQ86T13 490 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 KIF18BQ86Y91 864 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 EXOC8Q8IYI6 725 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 THNSL1Q8IYQ7 743 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 RNF169Q8NCN4 708 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 VN1R2Q8NFZ6 395 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 RSPH1Q8WYR4 309 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 MRPS27Q92552 414 aaKnown RBP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 ARL8AQ96BM9 186 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 PGBD4Q96DM1 585 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 CCDC51Q96ER9 411 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 CPB2Q96IY4 423 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 MSLNLQ96KJ4 702 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 HIST1H2AHQ96KK5 128 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 ZNF558Q96NG5 402 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 HIST1H2AJQ99878 128 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 ORAI3Q9BRQ5 295 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 VN1R3Q9BXE9 311 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 EIF2AQ9BY44 585 aaKnown RBP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 MRPL9Q9BYD2 267 aaKnown RBP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 NFKBIZQ9BYH8 718 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 PITHD1Q9GZP4 211 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 NRDE2Q9H7Z3 1164 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 UPF2Q9HAU5 1272 aaKnown RBP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 TBC1D13Q9NVG8 400 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 MARCH5Q9NX47 278 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 ING1Q9UK53 422 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 LZTS1Q9Y250 596 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 PLAAQ9Y263 795 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 PCDHB2Q9Y5E7 798 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 C5orf42Q9H799 3197 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 TDRD15B5MCY1 1934 aaKnown RBP4.56□□□□□ -1.68
VTI1B-203ENST00000554636 ZMYM2Q9UBW7 1377 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 CNTNAP2Q9UHC6 1331 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 A0A0A6YYJ9 748 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 A0A0A6YYK5 440 aaPredicted RBP4.56□□□□□ -1.68
VTI1B-203ENST00000554636 ARHGEF35A5YM69 484 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 PP2D1A8MPX8 630 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 INO80B-WBP1J3KQ70 363 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 LAD1O00515 517 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 PER2O15055 1255 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 B4GALT5O43286 388 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 MBTPS2O43462 519 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 NCK2O43639 380 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 ERLIN2O94905 339 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 EYA4O95677 639 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 SLPIP03973 132 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 GALTP07902 379 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 CLEC2LP0C7M8 214 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 MYCLP1P12525 358 aaPredicted RBP4.56□□□□□ -1.68
VTI1B-203ENST00000554636 ARF4P18085 180 aaPredicted RBP4.56□□□□□ -1.68
VTI1B-203ENST00000554636 NCLP19338 710 aaKnown RBP4.56□□□□□ -1.68
VTI1B-203ENST00000554636 AXLP30530 894 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 PPM1AP35813 382 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 CCT6AP40227 531 aaKnown RBP4.56□□□□□ -1.68
VTI1B-203ENST00000554636 PRPHP41219 470 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 NAMPTP43490 491 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 NRIP1P48552 1158 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 SLC11A1P49279 550 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 MAPK7Q13164 816 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 KCNC3Q14003 757 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 TFDP1Q14186 410 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 CLUL1Q15846 466 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 FAM187BQ17R55 369 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 LSM12Q3MHD2 195 aaKnown RBP4.56□□□□□ -1.68
VTI1B-203ENST00000554636 LONRF3Q496Y0 759 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 RILPL1Q5EBL4 403 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 PLPP4Q5VZY2 271 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 NOTUMQ6P988 496 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 Q6ZRM9 215 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 ESPNLQ6ZVH7 1005 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 USP51Q70EK9 711 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 MAEAQ7L5Y9 396 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 KCNK18Q7Z418 384 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 AHI1Q8N157 1196 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 MCPH1Q8NEM0 835 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 ERMNQ8TAM6 284 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 PPP2R3CQ969Q6 453 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 ZNF503Q96F45 646 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 CCDC43Q96MW1 224 aaKnown RBP4.56□□□□□ -1.68
VTI1B-203ENST00000554636 CDCA3Q99618 268 aaPredicted RBP4.56□□□□□ -1.68
VTI1B-203ENST00000554636 TCF25Q9BQ70 676 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 TMEM175Q9BSA9 504 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 SOX7Q9BT81 388 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 MMTAG2Q9BU76 263 aaKnown RBP4.56□□□□□ -1.68
VTI1B-203ENST00000554636 KIFC3Q9BVG8 833 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 ZBP1Q9H171 429 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 RSAD1Q9HA92 442 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 MSL2Q9HCI7 577 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 ING3Q9NXR8 418 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 SPG21Q9NZD8 308 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 CD207Q9UJ71 328 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 BARX2Q9UMQ3 279 aaPredicted RBP4.56□□□□□ -1.68
VTI1B-203ENST00000554636 SMC3Q9UQE7 1217 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 GIT1Q9Y2X7 761 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 KIF3AQ9Y496 699 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 HES2Q9Y543 173 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 IPPQ9Y573 584 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 MYH11P35749 1972 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 TRIP11Q15643 1979 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms