RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 NOP9Q86U38 636 aaKnown RBP7.81□□□□□ -1.16
LINC00640-201ENST00000554409 METTL3Q86U44 580 aaKnown RBP7.81□□□□□ -1.16
LINC00640-201ENST00000554409 DEFB106AQ8N104 65 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 AOPEPQ8N6M6 819 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 HJURPQ8NCD3 748 aaPredicted RBP7.81□□□□□ -1.16
LINC00640-201ENST00000554409 BTN2A3PQ96KV6 586 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 SPACA7Q96KW9 195 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 PRICKLE1Q96MT3 831 aaPredicted RBP7.81□□□□□ -1.16
LINC00640-201ENST00000554409 FUCA2Q9BTY2 467 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 PRR14Q9BWN1 585 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 TPSD1Q9BZJ3 242 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 SYNCQ9H7C4 482 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 PARD6AQ9NPB6 346 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 FAM207AQ9NSI2 230 aaPredicted RBP7.81□□□□□ -1.16
LINC00640-201ENST00000554409 TMEM51Q9NW97 253 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.81□□□□□ -1.16
LINC00640-201ENST00000554409 ELOVL2Q9NXB9 296 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 RRN3Q9NYV6 651 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 NOCTQ9UK39 431 aaKnown RBP7.81□□□□□ -1.16
LINC00640-201ENST00000554409 RIF1Q5UIP0 2472 aaKnown RBP7.81□□□□□ -1.16
LINC00640-201ENST00000554409 CEP192Q8TEP8 1941 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 NUP205Q92621 2012 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 THADAQ6YHU6 1953 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 ZNF292O60281 2723 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 GOLGA6L7A0A1B0GV03 622 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 TYW5A2RUC4 315 aaKnown RBP7.8□□□□□ -1.16
LINC00640-201ENST00000554409 KCNU1A8MYU2 1149 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 PRR5-ARHGAP8B1AHC4 643 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 DCLK1O15075 740 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 TBL1XO60907 577 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 GFPT2O94808 682 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 CYP1A1P04798 512 aaPredicted RBP7.8□□□□□ -1.16
LINC00640-201ENST00000554409 MMEP08473 750 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 SLC2A3P11169 496 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 PABPC1P11940 636 aaKnown RBP7.8□□□□□ -1.16
LINC00640-201ENST00000554409 ATP1A3P13637 1013 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 PTMSP20962 102 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 CDK11BP21127 795 aaKnown RBP7.8□□□□□ -1.16
LINC00640-201ENST00000554409 CCR1P32246 355 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 NOS2P35228 1153 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 STAT1P42224 750 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 MATKP42679 507 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 WASP42768 502 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 NOMO3P69849 1222 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 PITX1P78337 314 aaPredicted RBP7.8□□□□□ -1.16
LINC00640-201ENST00000554409 ARHGAP8P85298 464 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 CDK17Q00537 523 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 CDR2Q01850 454 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 LMNB2Q03252 620 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 STARD3Q14849 445 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 KLHL40Q2TBA0 621 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 MAP7D1Q3KQU3 841 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 ZC3H12AQ5D1E8 599 aaKnown RBP7.8□□□□□ -1.16
LINC00640-201ENST00000554409 SPDYCQ5MJ68 293 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 PLA2G2CQ5R387 149 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 TTC39BQ5VTQ0 682 aaPredicted RBP7.8□□□□□ -1.16
LINC00640-201ENST00000554409 TAF3Q5VWG9 929 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 KIAA1211LQ6NV74 962 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 RFWD3Q6PCD5 774 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 PRR23CQ6ZRP0 262 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 ARCQ7LC44 396 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 ADIPOR2Q86V24 386 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 ERICH1Q86X53 443 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 XYLT1Q86Y38 959 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 DHX40Q8IX18 779 aaKnown RBP7.8□□□□□ -1.16
LINC00640-201ENST00000554409 AHI1Q8N157 1196 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 ATP6V0D2Q8N8Y2 350 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 MSANTD4Q8NCY6 345 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 NEK11Q8NG66 645 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 FIBINQ8TAL6 211 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 ADAM32Q8TC27 787 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 WFDC5Q8TCV5 224 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 HMGB4Q8WW32 186 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 NT5C3BQ969T7 300 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 PGAP3Q96FM1 320 aaPredicted RBP7.8□□□□□ -1.16
LINC00640-201ENST00000554409 LMLNQ96KR4 655 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 SPAG5Q96R06 1193 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 NUCKS1Q9H1E3 243 aaKnown RBP7.8□□□□□ -1.16
LINC00640-201ENST00000554409 PDCL3Q9H2J4 239 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 FAM204AQ9H8W3 233 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 NLRC4Q9NPP4 1024 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 SEMA4GQ9NTN9 838 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 ABCB8Q9NUT2 735 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 DDIT4Q9NX09 232 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 CACNA2D2Q9NY47 1150 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 BCCIPQ9P287 314 aaKnown RBP eCLIP7.8□□□□□ -1.16
LINC00640-201ENST00000554409 SLC12A6Q9UHW9 1150 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 GGA2Q9UJY4 613 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 USP18Q9UMW8 372 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 STON1Q9Y6Q2 735 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 VPS13AQ96RL7 3174 aa7.8□□□□□ -1.16
LINC00640-201ENST00000554409 GPR179Q6PRD1 2367 aa7.79□□□□□ -1.16
LINC00640-201ENST00000554409 BCLAF3A2AJT9 711 aaKnown RBP7.79□□□□□ -1.16
LINC00640-201ENST00000554409 SMTNL1A8MU46 457 aa7.79□□□□□ -1.16
LINC00640-201ENST00000554409 WASH3PC4AMC7 463 aa7.79□□□□□ -1.16
LINC00640-201ENST00000554409 F5H5T6 163 aa7.79□□□□□ -1.16
LINC00640-201ENST00000554409 ZBTB24O43167 697 aaPredicted RBP7.79□□□□□ -1.16
LINC00640-201ENST00000554409 ZNF217O75362 1048 aa7.79□□□□□ -1.16
LINC00640-201ENST00000554409 GRAP2O75791 330 aa7.79□□□□□ -1.16
LINC00640-201ENST00000554409 MOCS2O96007 188 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms