RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 E9PAM4 449 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 F5H5T6 163 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 RFXAPO00287 272 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 LIASO43766 372 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 ACSL4O60488 711 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 MOSPD3O75425 235 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 ECEL1O95672 775 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 GLP2RO95838 553 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 ITGAVP06756 1048 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 ATXN8OSP0DMR3 200 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 PECAM1P16284 738 aaPredicted RBP7.89□□□□□ -1.15
TDP1-209ENST00000554180 RHOQP17081 205 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 ERCC2P18074 760 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 MX2P20592 715 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 MCM3P25205 808 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 CORO1AP31146 461 aaKnown RBP7.89□□□□□ -1.15
TDP1-209ENST00000554180 AVPR1AP37288 418 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 CCR2P41597 374 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 KCNQ1P51787 676 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 DYNLT1P63172 113 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 DR1Q01658 176 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 OTUD4Q01804 1114 aaKnown RBP7.89□□□□□ -1.15
TDP1-209ENST00000554180 ZNF33AQ06730 810 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 HYAL1Q12794 435 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 AUHQ13825 339 aaKnown RBP7.89□□□□□ -1.15
TDP1-209ENST00000554180 COL19A1Q14993 1142 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 LLGL1Q15334 1064 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 OASLQ15646 514 aaKnown RBP7.89□□□□□ -1.15
TDP1-209ENST00000554180 SLC5A9Q2M3M2 681 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 ERCC6LQ2NKX8 1250 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 C5orf22Q49AR2 442 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 TCEAL5Q5H9L2 206 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 RABGAP1LQ5R372 815 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 ARTNQ5T4W7 220 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 ADGRF1Q5T601 910 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 GPR158Q5T848 1215 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 TTC39BQ5VTQ0 682 aaPredicted RBP7.89□□□□□ -1.15
TDP1-209ENST00000554180 ANKRD54Q6NXT1 300 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 Q6ZNB5 142 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 GRASPQ7Z6J2 395 aaPredicted RBP7.89□□□□□ -1.15
TDP1-209ENST00000554180 GPR149Q86SP6 731 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 CHSY1Q86X52 802 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 LRRC49Q8IUZ0 686 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 KLHL7Q8IXQ5 586 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 CCDC105Q8IYK2 499 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 ARL14EPQ8N8R7 260 aaPredicted RBP7.89□□□□□ -1.15
TDP1-209ENST00000554180 RTL3Q8N8U3 475 aaKnown RBP7.89□□□□□ -1.15
TDP1-209ENST00000554180 MAB21L3Q8N8X9 362 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 ATL2Q8NHH9 583 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 C1orf54Q8WWF1 131 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 ATG4AQ8WYN0 398 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 OLFM3Q96PB7 478 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 SLC22A12Q96S37 553 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 SLC46A2Q9BY10 475 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 MAGEB5Q9BZ81 275 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 ZYG11BQ9C0D3 744 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 BRD8Q9H0E9 1235 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 SIK2Q9H0K1 926 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 RAB17Q9H0T7 212 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 KIF9Q9HAQ2 790 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 PIDD1Q9HB75 910 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 HCFC1R1Q9NWW0 138 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 AMACRQ9UHK6 382 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 XPO7Q9UIA9 1087 aaKnown RBP7.89□□□□□ -1.15
TDP1-209ENST00000554180 R3HDM2Q9Y2K5 976 aaKnown RBP7.89□□□□□ -1.15
TDP1-209ENST00000554180 MRPS23Q9Y3D9 190 aaKnown RBP7.89□□□□□ -1.15
TDP1-209ENST00000554180 CPQQ9Y646 472 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 CDH23Q9H251 3354 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 ATG2AQ2TAZ0 1938 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 UQCRHLA0A096LP55 91 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 E2F8A0AVK6 867 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 DRGXA6NNA5 263 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 PPP1R12AO14974 1030 aaPredicted RBP7.88□□□□□ -1.15
TDP1-209ENST00000554180 RAD51CO43502 376 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 MFSD11O43934 449 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 GREM1O60565 184 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 KLKB1P03952 638 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 UQCRHP07919 91 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 HMBSP08397 361 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 RBP3P10745 1247 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 TACR2P21452 398 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 AMPD1P23109 780 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 TNFRSF8P28908 595 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 STIP1P31948 543 aaKnown RBP7.88□□□□□ -1.15
TDP1-209ENST00000554180 MAPKAPK2P49137 400 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 EIF3EP60228 445 aaKnown RBP7.88□□□□□ -1.15
TDP1-209ENST00000554180 USP4Q13107 963 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 ADAM15Q13444 863 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 PDK1Q15118 436 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 TEAD2Q15562 447 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 FAM133BQ5BKY9 247 aaKnown RBP7.88□□□□□ -1.15
TDP1-209ENST00000554180 ZNF697Q5TEC3 545 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 PRPF38BQ5VTL8 546 aaKnown RBP7.88□□□□□ -1.15
TDP1-209ENST00000554180 NADSYN1Q6IA69 706 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 RWDD4Q6NW29 188 aaKnown RBP7.88□□□□□ -1.15
TDP1-209ENST00000554180 FBXL22Q6P050 247 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 WDR93Q6P2C0 686 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 TTC27Q6P3X3 843 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 TMC5Q6UXY8 1006 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 HTR3DQ70Z44 454 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms