RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 RGL4Q8IZJ4 473 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 MINDY1Q8N5J2 469 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 DEFB119Q8N690 84 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 KDM1BQ8NB78 822 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 HJURPQ8NCD3 748 aaPredicted RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 DEFB124Q8NES8 71 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 FIBINQ8TAL6 211 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 SORCS1Q8WY21 1168 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 TOE1Q96GM8 510 aaKnown RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 SLC39A13Q96H72 371 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 LMLNQ96KR4 655 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 FCRL2Q96LA5 508 aaPredicted RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 KREMEN1Q96MU8 473 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 GPR174Q9BXC1 333 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 SRRTQ9BXP5 876 aaKnown RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 SLC4A5Q9BY07 1137 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 INTS2Q9H0H0 1204 aaKnown RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 SLC6A17Q9H1V8 727 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 OSGEPQ9NPF4 335 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 CD93Q9NPY3 652 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 ABCB8Q9NUT2 735 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 SUN2Q9UH99 717 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 RWDD2AQ9UIY3 292 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 SCML1Q9UN30 329 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 NEUROG3Q9Y4Z2 214 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 CHD6Q8TD26 2715 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 COL5A1P20908 1838 aaPredicted RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 ACACAQ13085 2346 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 MEI4A8MW99 385 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 H0Y626 953 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 BIN1O00499 593 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 TSPAN3O60637 253 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 TBL1XO60907 577 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 TRIM16O95361 564 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 IGLV3-25P01717 112 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 ASLP04424 464 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 GLI1P08151 1106 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 ACADMP11310 421 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 CD59P13987 128 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 POLR2EP19388 210 aaKnown RBP6.86□□□□□ -1.31
SLIRP-203ENST00000554074 SLC6A4P31645 630 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 RDXP35241 583 aaKnown RBP6.86□□□□□ -1.31
SLIRP-203ENST00000554074 SGSHP51688 502 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 MTA1Q13330 715 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 EIF4EBP2Q13542 120 aaPredicted RBP6.86□□□□□ -1.31
SLIRP-203ENST00000554074 ZNF423Q2M1K9 1284 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 FNDC3BQ53EP0 1204 aaKnown RBP6.86□□□□□ -1.31
SLIRP-203ENST00000554074 MS4A13Q5J8X5 152 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 DCAF12L1Q5VU92 463 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 MBLAC2Q68D91 279 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 NADSYN1Q6IA69 706 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 IL27RAQ6UWB1 636 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 USP30Q70CQ3 517 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 TMEM110Q86TL2 294 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 KDF1Q8NAX2 398 aaPredicted RBP6.86□□□□□ -1.31
SLIRP-203ENST00000554074 C1orf216Q8TAB5 229 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 DQX1Q8TE96 717 aaKnown RBP6.86□□□□□ -1.31
SLIRP-203ENST00000554074 CLEC4CQ8WTT0 213 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 ZNF606Q8WXB4 792 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 TTC17Q96AE7 1141 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 MED15Q96RN5 788 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 GTPBP2Q9BX10 602 aaKnown RBP6.86□□□□□ -1.31
SLIRP-203ENST00000554074 TMEM121BQ9BXQ6 578 aaPredicted RBP6.86□□□□□ -1.31
SLIRP-203ENST00000554074 ADAM33Q9BZ11 813 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 LHX5Q9H2C1 402 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 THAP9Q9H5L6 903 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 UBE2TQ9NPD8 197 aaPredicted RBP6.86□□□□□ -1.31
SLIRP-203ENST00000554074 PRSS16Q9NQE7 514 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 LMBRD1Q9NUN5 540 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 ASNSD1Q9NWL6 643 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 KIAA1468Q9P260 1216 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 PCDHGB2Q9Y5G2 931 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 TDRD6O60522 2096 aaKnown RBP6.86□□□□□ -1.31
SLIRP-203ENST00000554074 TRPM6Q9BX84 2022 aa6.86□□□□□ -1.31
SLIRP-203ENST00000554074 CFAP47Q6ZTR5 3102 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 BAHCC1Q9P281 2608 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 ITIH6Q6UXX5 1313 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 FAM221BA6H8Z2 402 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 BCAT2O15382 392 aaPredicted RBP6.85□□□□□ -1.31
SLIRP-203ENST00000554074 PAPSS1O43252 624 aaPredicted RBP6.85□□□□□ -1.31
SLIRP-203ENST00000554074 GADD45BO75293 160 aaPredicted RBP6.85□□□□□ -1.31
SLIRP-203ENST00000554074 LETM1O95202 739 aaPredicted RBP6.85□□□□□ -1.31
SLIRP-203ENST00000554074 LUC7L3O95232 432 aaKnown RBP6.85□□□□□ -1.31
SLIRP-203ENST00000554074 CER1O95813 267 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 APOEP02649 317 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 SRPRAP08240 638 aaKnown RBP6.85□□□□□ -1.31
SLIRP-203ENST00000554074 SLC2A3P11169 496 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 KRT5P13647 590 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 GNA15P30679 374 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 CD70P32970 193 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 VASPP50552 380 aaPredicted RBP6.85□□□□□ -1.31
SLIRP-203ENST00000554074 STX17P56962 302 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 RPS14P62263 151 aaKnown RBP6.85□□□□□ -1.31
SLIRP-203ENST00000554074 YWHAZP63104 245 aaKnown RBP6.85□□□□□ -1.31
SLIRP-203ENST00000554074 SFSWAPQ12872 951 aaKnown RBP6.85□□□□□ -1.31
SLIRP-203ENST00000554074 FOXC1Q12948 553 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 GRIK2Q13002 908 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 PDCLQ13371 301 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 SLC12A1Q13621 1099 aa6.85□□□□□ -1.31
SLIRP-203ENST00000554074 TTC31Q49AM3 519 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms