RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 NIPAL4Q0D2K0 466 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 TSNAXIP1Q2TAA8 658 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 OTUD1Q5VV17 481 aaPredicted RBP14.97□□□□□ -0.01
ACTN1-211ENST00000553882 STRADAQ7RTN6 431 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 B3GALNT2Q8NCR0 500 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 SH3TC2Q8TF17 1288 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 DNAJB3Q8WWF6 145 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 CDKL2Q92772 493 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 ZNF358Q9NW07 568 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 ZFATQ9P243 1243 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 RBM47A0AV96 593 aaKnown RBP14.97□□□□□ -0.01
ACTN1-211ENST00000553882 BIRC5O15392 142 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 FDFT1P37268 417 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 DUSP28Q4G0W2 176 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 EFHC1Q5JVL4 640 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 MBLAC2Q68D91 279 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 LRRC8BQ6P9F7 803 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 ATG14Q6ZNE5 492 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 HFE2Q6ZVN8 426 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 MARK2Q7KZI7 788 aaKnown RBP14.97□□□□□ -0.01
ACTN1-211ENST00000553882 CMC1Q7Z7K0 106 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 TMPRSS6Q8IU80 811 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 ZNF567Q8N184 647 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 SLC25A41Q8N5S1 370 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 TXNDC16Q9P2K2 825 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 GTF2IRD1Q9UHL9 959 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 RPS6KL1Q9Y6S9 549 aa14.97□□□□□ -0.01
ACTN1-211ENST00000553882 DYNC1LI2O43237 492 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-211ENST00000553882 HUS1O60921 280 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 ALDH1A2O94788 518 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 STK10O94804 968 aaKnown RBP14.96□□□□□ -0.01
ACTN1-211ENST00000553882 FGF3P11487 239 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-211ENST00000553882 CYP2C9P11712 490 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 VHLP40337 213 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 ABCG1P45844 678 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 ACADSBP45954 432 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 SLC1A6P48664 564 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 PRAMEF19Q5SWL8 479 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 STEAP4Q687X5 459 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 CAPRIN2Q6IMN6 1127 aaKnown RBP14.96□□□□□ -0.01
ACTN1-211ENST00000553882 KYAT3Q6YP21 454 aaKnown RBP14.96□□□□□ -0.01
ACTN1-211ENST00000553882 TIFABQ6ZNK6 161 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 PID1Q7Z2X4 250 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 CTU1Q7Z7A3 348 aaKnown RBP14.96□□□□□ -0.01
ACTN1-211ENST00000553882 OSTM1Q86WC4 334 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 RASSF3Q86WH2 238 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 C10orf107Q8IVU9 208 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 POU5F2Q8N7G0 328 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 SHKBP1Q8TBC3 707 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 SCG3Q8WXD2 468 aaKnown RBP14.96□□□□□ -0.01
ACTN1-211ENST00000553882 SLC10A4Q96EP9 437 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 HSFY1Q96LI6 401 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 ANKRD27Q96NW4 1050 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 CCDC106Q9BWC9 280 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 SHCBP1LQ9BZQ2 653 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 MMADHCQ9H3L0 296 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-211ENST00000553882 PIGVQ9NUD9 493 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 TAGLN3Q9UI15 199 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 SPECC1L-ADORA2AF8WAN1 911 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 FAM72CH0Y354 149 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 NEBLO76041 1014 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 SMIM10L2AP0DMW4 78 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 SMIM10L2BP0DMW5 78 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 DARSP14868 501 aaKnown RBP14.96□□□□□ -0.01
ACTN1-211ENST00000553882 PGAM1P18669 254 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 TAF6P49848 677 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 WASHC5Q12768 1159 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 HIC1Q14526 733 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 FAM72AQ5TYM5 149 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 FAM72DQ6L9T8 149 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 LRRC74BQ6ZQY2 392 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 ARCQ7LC44 396 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 FAM72BQ86X60 149 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.96□□□□□ -0.01
ACTN1-211ENST00000553882 RNF169Q8NCN4 708 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 PIWIL2Q8TC59 973 aaKnown RBP14.96□□□□□ -0.01
ACTN1-211ENST00000553882 ATP2A3Q93084 1043 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 ZNF333Q96JL9 665 aa14.96□□□□□ -0.01
ACTN1-211ENST00000553882 DICER1Q9UPY3 1922 aaKnown RBP14.96□□□□□ -0.01
ACTN1-211ENST00000553882 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.96□□□□□ -0.02
ACTN1-211ENST00000553882 HACD1B0YJ81 288 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 PLIN3O60664 434 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 OPHN1O60890 802 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 TOMM70O94826 608 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 TYK2P29597 1187 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 SLC34A1Q06495 639 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 PCLAFQ15004 111 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 TEDDM1Q5T9Z0 273 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 FAM91A1Q658Y4 838 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 RSPH3Q86UC2 560 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 WDR75Q8IWA0 830 aaKnown RBP14.96□□□□□ -0.02
ACTN1-211ENST00000553882 SCUBE1Q8IWY4 988 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 TNS4Q8IZW8 715 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 ARHGAP24Q8N264 748 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 OR52K1Q8NGK4 314 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 AZIN2Q96A70 460 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 ZNF560Q96MR9 790 aa14.96□□□□□ -0.02
ACTN1-211ENST00000553882 XPO1O14980 1071 aaKnown RBP14.95□□□□□ -0.02
ACTN1-211ENST00000553882 GLRA3O75311 464 aa14.95□□□□□ -0.02
ACTN1-211ENST00000553882 CD4P01730 458 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms