RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 CARD9Q9H257 536 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 DPEP3Q9H4B8 488 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 POLMQ9NP87 494 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-209ENST00000553659 TMEM30AQ9NV96 361 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 TAS2R14Q9NYV8 317 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 USP24Q9UPU5 2620 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 LAMA1P25391 3075 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 E2F8A0AVK6 867 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 A8MXQ7 604 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 PATE3B3GLJ2 98 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 SGK1O00141 431 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 PGRMC1O00264 195 aaKnown RBP16.68■□□□□ 0.26
ACTN1-209ENST00000553659 PDE2AO00408 941 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-209ENST00000553659 CLDN5O00501 218 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 KCNK3O14649 394 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 SCAMP3O14828 347 aaKnown RBP16.68■□□□□ 0.26
ACTN1-209ENST00000553659 BUB1BO60566 1050 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-209ENST00000553659 CLSTN1O94985 981 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 RTN3O95197 1032 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-209ENST00000553659 ZRANB2O95218 330 aaKnown RBP eCLIP16.68■□□□□ 0.26
ACTN1-209ENST00000553659 STAU1O95793 577 aaKnown RBP16.68■□□□□ 0.26
ACTN1-209ENST00000553659 PROS1P07225 676 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 CEACAM1P13688 526 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 YWHAQP27348 245 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 GNA15P30679 374 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 P2RY2P41231 377 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 GRIA2P42262 883 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 TNFRSF4P43489 277 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 KIR2DL1P43626 348 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-209ENST00000553659 NSFP46459 744 aaKnown RBP16.68■□□□□ 0.26
ACTN1-209ENST00000553659 MESP2Q0VG99 397 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 ZNF699Q32M78 642 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 EOGTQ5NDL2 527 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 SH3PXD2AQ5TCZ1 1133 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 EMC10Q5UCC4 262 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 C12orf40Q86WS4 652 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 SFTPA1Q8IWL2 248 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 RASGEF1CQ8N431 466 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 UBR7Q8N806 425 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 RBBP8NLQ8NC74 664 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-209ENST00000553659 B3GALNT2Q8NCR0 500 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 PDZD8Q8NEN9 1154 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 WHAMMQ8TF30 809 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 OVCA2Q8WZ82 227 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 PIGKQ92643 395 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 ZNF653Q96CK0 615 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 ZNF518BQ9C0D4 1074 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 ACBD3Q9H3P7 528 aa16.68■□□□□ 0.26
ACTN1-209ENST00000553659 APOBEC3GQ9HC16 384 aaKnown RBP16.68■□□□□ 0.26
ACTN1-209ENST00000553659 ADAMTS9Q9P2N4 1935 aa16.67■□□□□ 0.26
ACTN1-209ENST00000553659 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.67■□□□□ 0.26
ACTN1-209ENST00000553659 MAP3K13O43283 966 aa16.67■□□□□ 0.26
ACTN1-209ENST00000553659 LSM8O95777 96 aaKnown RBP16.67■□□□□ 0.26
ACTN1-209ENST00000553659 CYP1A1P04798 512 aaPredicted RBP16.67■□□□□ 0.26
ACTN1-209ENST00000553659 ADH5P11766 374 aa16.67■□□□□ 0.26
ACTN1-209ENST00000553659 UNGP13051 313 aaPredicted RBP16.67■□□□□ 0.26
ACTN1-209ENST00000553659 CSRP1P21291 193 aaKnown RBP16.67■□□□□ 0.26
ACTN1-209ENST00000553659 ZNF132P52740 706 aa16.67■□□□□ 0.26
ACTN1-209ENST00000553659 MYL6P60660 151 aa16.67■□□□□ 0.26
ACTN1-209ENST00000553659 CENPCQ03188 943 aa16.67■□□□□ 0.26
ACTN1-209ENST00000553659 C2orf54Q08AI8 447 aa16.67■□□□□ 0.26
ACTN1-209ENST00000553659 IFRD2Q12894 506 aaPredicted RBP16.67■□□□□ 0.26
ACTN1-209ENST00000553659 LPCAT2Q7L5N7 544 aa16.67■□□□□ 0.26
ACTN1-209ENST00000553659 RLN3Q8WXF3 142 aa16.67■□□□□ 0.26
ACTN1-209ENST00000553659 OTUB2Q96DC9 234 aa16.67■□□□□ 0.26
ACTN1-209ENST00000553659 ARHGEF26Q96DR7 871 aa16.67■□□□□ 0.26
ACTN1-209ENST00000553659 VRTNQ9H8Y1 702 aa16.67■□□□□ 0.26
ACTN1-209ENST00000553659 ARHGEF4Q9NR80 690 aa16.67■□□□□ 0.26
ACTN1-209ENST00000553659 NXF1Q9UBU9 619 aaKnown RBP16.67■□□□□ 0.26
ACTN1-209ENST00000553659 EVLQ9UI08 416 aaPredicted RBP16.67■□□□□ 0.26
ACTN1-209ENST00000553659 TNFRSF10BO14763 440 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 COCHO43405 550 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 TNFRSF8P28908 595 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 CXCR5P32302 372 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 GAD2Q05329 585 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 ZNF252P-AS1Q0IIN9 211 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 LMAN2Q12907 356 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 GPS2Q13227 327 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 BYSLQ13895 437 aaKnown RBP16.66■□□□□ 0.26
ACTN1-209ENST00000553659 SPDYCQ5MJ68 293 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 LY6G5CQ5SRR4 150 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 HECTD3Q5T447 861 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 SNX30Q5VWJ9 437 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 C8orf74Q6P047 294 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 TMEM270Q6UE05 265 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 ZNF564Q8TBZ8 553 aaPredicted RBP16.66■□□□□ 0.26
ACTN1-209ENST00000553659 FBXO32Q969P5 355 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 SPACA7Q96KW9 195 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 KCNK16Q96T55 309 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 XYLT2Q9H1B5 865 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 CYP3A43Q9HB55 503 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 MRPL47Q9HD33 250 aaKnown RBP16.66■□□□□ 0.26
ACTN1-209ENST00000553659 OSGEPQ9NPF4 335 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 BCCIPQ9P287 314 aaKnown RBP eCLIP16.66■□□□□ 0.26
ACTN1-209ENST00000553659 CHORDC1Q9UHD1 332 aaPredicted RBP16.66■□□□□ 0.26
ACTN1-209ENST00000553659 CEP83Q9Y592 693 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 SCINQ9Y6U3 715 aa16.66■□□□□ 0.26
ACTN1-209ENST00000553659 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.65■□□□□ 0.26
ACTN1-209ENST00000553659 MED7O43513 233 aa16.65■□□□□ 0.26
ACTN1-209ENST00000553659 CEP104O60308 925 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms