RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 SMARCD2Q92925 531 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 BHMTQ93088 406 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 HLA-CQ95604 372 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 HAUS1Q96CS2 278 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 TBC1D31Q96DN5 1066 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 ASB16Q96NS5 453 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 RPRD1AQ96P16 312 aaPredicted RBP10.09□□□□□ -0.79
CHD8-204ENST00000553622 CSPG4P5Q96PW8 444 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 OSBPL8Q9BZF1 889 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 OSBPL2Q9H1P3 480 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 CWC15Q9P013 229 aaKnown RBP10.09□□□□□ -0.79
CHD8-204ENST00000553622 hCG_1818297A0A087WSY0 165 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 E2F8A0AVK6 867 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 TYW5A2RUC4 315 aaKnown RBP10.08□□□□□ -0.8
CHD8-204ENST00000553622 GRXCR2A6NFK2 248 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 C3orf70A6NLC5 250 aaPredicted RBP10.08□□□□□ -0.8
CHD8-204ENST00000553622 HEPACAM2A8MVW5 462 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 APOL1O14791 398 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 CST8O60676 142 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 LRIG2O94898 1065 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 TJP3O95049 919 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 SLC6A4P31645 630 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 ARSEP51690 589 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 MLLT6P55198 1093 aaPredicted RBP10.08□□□□□ -0.8
CHD8-204ENST00000553622 CKAP4Q07065 602 aaKnown RBP10.08□□□□□ -0.8
CHD8-204ENST00000553622 SMAD4Q13485 552 aaKnown RBP10.08□□□□□ -0.8
CHD8-204ENST00000553622 TFDP2Q14188 446 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 ZNF77Q15935 545 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 PPP2R5EQ16537 467 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 RABGAP1LQ5R372 815 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 ADGRF1Q5T601 910 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 FBXL22Q6P050 247 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 C1orf228Q6PIY5 440 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 POTEHQ6S545 545 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 TPGS1Q6ZTW0 290 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 RFX8Q6ZV50 586 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 OTOP3Q7RTS5 596 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 CIR1Q86X95 450 aaPredicted RBP10.08□□□□□ -0.8
CHD8-204ENST00000553622 SLC13A5Q86YT5 568 aaPredicted RBP10.08□□□□□ -0.8
CHD8-204ENST00000553622 YAF2Q8IY57 180 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 CFAP52Q8N1V2 620 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 NAP1L3Q99457 506 aaPredicted RBP10.08□□□□□ -0.8
CHD8-204ENST00000553622 KXD1Q9BQD3 176 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 ZNF670Q9BS34 389 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 AP1M1Q9BXS5 423 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 CATSPERBQ9H7T0 1116 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 KIF9Q9HAQ2 790 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 ZFP14Q9HCL3 533 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 MPP6Q9NZW5 540 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 CDC23Q9UJX2 597 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 ZNF510Q9Y2H8 683 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 WNT6Q9Y6F9 365 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 CHD5Q8TDI0 1954 aa10.08□□□□□ -0.8
CHD8-204ENST00000553622 GOLGA6L10A0A0M3HER8 536 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 TCRBV7S2A1N4TA0A589 114 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 KRIT1O00522 736 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 CES2O00748 559 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 SLC9A3R1O14745 358 aaPredicted RBP10.07□□□□□ -0.8
CHD8-204ENST00000553622 MBTPS2O43462 519 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 TBL1XO60907 577 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 LATS1O95835 1130 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 LAMP2P13473 410 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 IFNAR2P48551 515 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 IRAK1P51617 712 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 RPS24P62847 133 aaKnown RBP10.07□□□□□ -0.8
CHD8-204ENST00000553622 USP4Q13107 963 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 SEMA3BQ13214 749 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 TUBB2AQ13885 445 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 WHAMMP3Q1A5X7 153 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 FAM133BQ5BKY9 247 aaKnown RBP10.07□□□□□ -0.8
CHD8-204ENST00000553622 TMCO3Q6UWJ1 677 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 Q6ZNB5 142 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 HTR3DQ70Z44 454 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 TFAP2DQ7Z6R9 452 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 CREG2Q8IUH2 290 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 CCDC33Q8N5R6 958 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 TDRD5Q8NAT2 981 aaKnown RBP10.07□□□□□ -0.8
CHD8-204ENST00000553622 NETO2Q8NC67 525 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 MAFAQ8NHW3 353 aaPredicted RBP10.07□□□□□ -0.8
CHD8-204ENST00000553622 PCDH19Q8TAB3 1148 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 RIN3Q8TB24 985 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 BPIFB1Q8TDL5 484 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 DDI1Q8WTU0 396 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 SUSD6Q92537 303 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 TSC1Q92574 1164 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 IGSF8Q969P0 613 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 AZIN2Q96A70 460 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 RSPRY1Q96DX4 576 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 C1orf74Q96LT6 269 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 RNF157Q96PX1 679 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 PRMT1Q99873 361 aaKnown RBP10.07□□□□□ -0.8
CHD8-204ENST00000553622 FAM118BQ9BPY3 351 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 HERPUD2Q9BSE4 406 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 TUBB2BQ9BVA1 445 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 ZYG11BQ9C0D3 744 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 ARHGEF4Q9NR80 690 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 DUS2Q9NX74 493 aaKnown RBP10.07□□□□□ -0.8
CHD8-204ENST00000553622 RCOR3Q9P2K3 495 aaPredicted RBP10.07□□□□□ -0.8
CHD8-204ENST00000553622 MFHAS1Q9Y4C4 1052 aa10.07□□□□□ -0.8
CHD8-204ENST00000553622 HEY1Q9Y5J3 304 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms