RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 TMEM196Q5HYL7 178 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 PCID2Q5JVF3 399 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 NAA35Q5VZE5 725 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 DENND2CQ68D51 928 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 SLC9A4Q6AI14 798 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D1Q86TI0 1168 aaPredicted RBP4.31□□□□□ -1.72
PCNX4-206ENST00000553513 XAGE5Q8WWM1 108 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 ST8SIA4Q92187 359 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 STAMQ92783 540 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 ZUFSPQ96AP4 578 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 RBM17Q96I25 401 aaKnown RBP4.31□□□□□ -1.72
PCNX4-206ENST00000553513 NEUROD6Q96NK8 337 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 TWNKQ96RR1 684 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 FSD1LQ9BXM9 530 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 PAIP1Q9H074 479 aaKnown RBP4.31□□□□□ -1.72
PCNX4-206ENST00000553513 PLEKHA5Q9HAU0 1116 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 VEZTQ9HBM0 779 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 TBC1D22BQ9NU19 505 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 FLRT1Q9NZU1 646 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 KCND3Q9UK17 655 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 ADAMTS5Q9UNA0 930 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 DRG1Q9Y295 367 aaKnown RBP4.31□□□□□ -1.72
PCNX4-206ENST00000553513 UBE2J1Q9Y385 318 aaPredicted RBP4.31□□□□□ -1.72
PCNX4-206ENST00000553513 SNX14Q9Y5W7 946 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 KAT6BQ8WYB5 2073 aa4.31□□□□□ -1.72
PCNX4-206ENST00000553513 CGB1A6NKQ9 187 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 STX16-NPEPL1H3BU86 382 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 STX16O14662 325 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 ZNF213O14771 459 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 TSPAN4O14817 238 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 KLK10O43240 276 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 HNRNPRO43390 633 aaKnown RBP4.3□□□□□ -1.72
PCNX4-206ENST00000553513 TIPRLO75663 272 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 TJP3O95049 919 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 DDX58O95786 925 aaKnown RBP4.3□□□□□ -1.72
PCNX4-206ENST00000553513 CNPP09543 421 aaKnown RBP4.3□□□□□ -1.72
PCNX4-206ENST00000553513 CAPN3P20807 821 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 CHMP24386 653 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 THBS4P35443 961 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 PSMC2P35998 433 aaKnown RBP4.3□□□□□ -1.72
PCNX4-206ENST00000553513 ABCG1P45844 678 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 TUBP50607 506 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 CASP6P55212 293 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 TIRAPP58753 221 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 RPP30P78346 268 aaKnown RBP4.3□□□□□ -1.72
PCNX4-206ENST00000553513 TIAL1Q01085 375 aaKnown RBP eCLIP4.3□□□□□ -1.72
PCNX4-206ENST00000553513 TFF2Q03403 129 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 KRT32Q14532 448 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 TOMM20Q15388 145 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 SMAD1Q15797 465 aaKnown RBP4.3□□□□□ -1.72
PCNX4-206ENST00000553513 TRIM60Q495X7 471 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 TMEM119Q4V9L6 283 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 ACAD10Q6JQN1 1059 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 CCDC144NLQ6NUI1 221 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 CFAP161Q6P656 301 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 MTHFD1LQ6UB35 978 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 KRBA2Q6ZNG9 492 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 Q6ZWC4 215 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 LRRC8DQ7L1W4 858 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 ANKS1BQ7Z6G8 1248 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 CAND1Q86VP6 1230 aaKnown RBP4.3□□□□□ -1.72
PCNX4-206ENST00000553513 ABHD11Q8NFV4 315 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 SUN3Q8TAQ9 357 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 SLC22A17Q8WUG5 538 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 SOCS4Q8WXH5 440 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 OVCA2Q8WZ82 227 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 REPS1Q96D71 796 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 PIGSQ96S52 555 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 NUDT16L1Q9BRJ7 211 aaKnown RBP4.3□□□□□ -1.72
PCNX4-206ENST00000553513 REEP2Q9BRK0 252 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 SDF4Q9BRK5 362 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 TWSG1Q9GZX9 223 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 ACAD9Q9H845 621 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 TRIM36Q9NQ86 728 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 FSCN3Q9NQT6 498 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 BLOC1S4Q9NUP1 217 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 ORC3Q9UBD5 711 aaPredicted RBP4.3□□□□□ -1.72
PCNX4-206ENST00000553513 VPS51Q9UID3 782 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 CNOT7Q9UIV1 285 aaKnown RBP4.3□□□□□ -1.72
PCNX4-206ENST00000553513 RIMKLBQ9ULI2 386 aa4.3□□□□□ -1.72
PCNX4-206ENST00000553513 FSD2A1L4K1 749 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 FAM90A18PA6NE21 464 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 FAM90A16PA6NEW6 464 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 FAM90A9PA6NNJ1 464 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 PRSS47A8MTI9 375 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 FAM90A5PA8MXJ8 464 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 TISP43B9A030 160 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 INO80B-WBP1J3KQ70 363 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 K7ENM7 598 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 PEX12O00623 359 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 ERBB2P04626 1255 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 SLC3A2P08195 630 aaKnown RBP4.29□□□□□ -1.72
PCNX4-206ENST00000553513 CELA2AP08217 269 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 WEE2P0C1S8 567 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 FAM90A15PP0C7V4 464 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 FAM90A14PP0C7W9 464 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 PRKCHP24723 683 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 GRK5P34947 590 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 PBX1P40424 430 aa4.29□□□□□ -1.72
PCNX4-206ENST00000553513 CDK7P50613 346 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms