RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 C16orf96A6NNT2 1141 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 GOLGA6L6A8MZA4 724 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 MYO1GB0I1T2 1018 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 SYN3O14994 580 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 PPM1DO15297 605 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 HSPA4LO95757 839 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 ALDOAP04075 364 aaKnown RBP6.24□□□□□ -1.41
SCFD1-208ENST00000553278 TUBB4AP04350 444 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 PEPDP12955 493 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 IGHMBP2P38935 993 aaKnown RBP6.24□□□□□ -1.41
SCFD1-208ENST00000553278 CPA2P48052 419 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 FOXL2P58012 376 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 CXADRP78310 365 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 SP2Q02086 613 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 CDK18Q07002 472 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 PUM1Q14671 1186 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCFD1-208ENST00000553278 CRYMQ14894 314 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 CDC37Q16543 378 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-208ENST00000553278 FAM187BQ17R55 369 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 TMEM154Q6P9G4 183 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 KIAA1324Q6UXG2 1013 aaKnown RBP6.24□□□□□ -1.41
SCFD1-208ENST00000553278 DTX2Q86UW9 622 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 MON1AQ86VX9 555 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 LGI4Q8N135 537 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 WDTC1Q8N5D0 677 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 FRMD1Q8N878 549 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 LINC01356Q8N9X3 169 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 CLEC4CQ8WTT0 213 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 POMGNT1Q8WZA1 660 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 DACT3Q96B18 629 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-208ENST00000553278 PIP5K1AQ99755 562 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 ADPGKQ9BRR6 497 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 CTDSP1Q9GZU7 261 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 ZWILCHQ9H900 591 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 INTS13Q9NVM9 706 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 ZNF70Q9UC06 446 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-208ENST00000553278 NOX1Q9Y5S8 564 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 COPG1Q9Y678 874 aaKnown RBP6.24□□□□□ -1.41
SCFD1-208ENST00000553278 FPGT-TNNI3KV9GXZ4 949 aa6.24□□□□□ -1.41
SCFD1-208ENST00000553278 A1L4Q6 167 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 ZNF185O15231 689 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 SLC16A3O15427 465 aaKnown RBP6.23□□□□□ -1.41
SCFD1-208ENST00000553278 TGFB1I1O43294 461 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 HNRNPCL1O60812 293 aaKnown RBP6.23□□□□□ -1.41
SCFD1-208ENST00000553278 CFIP05156 583 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 URODP06132 367 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 CDH2P19022 906 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-208ENST00000553278 ADRA1DP25100 572 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 GCH1P30793 250 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 AFF3P51826 1226 aaKnown RBP6.23□□□□□ -1.41
SCFD1-208ENST00000553278 GOLGA8DPQ0D2H9 430 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 FOXL1Q12952 345 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 GPR162Q16538 588 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 GEN1Q17RS7 908 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 SPDYE7PQ495Y7 208 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 PDCD4Q53EL6 469 aaKnown RBP6.23□□□□□ -1.41
SCFD1-208ENST00000553278 PLEKHS1Q5SXH7 462 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 ZKSCAN2Q63HK3 967 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 SP5Q6BEB4 398 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-208ENST00000553278 MTHFD1LQ6UB35 978 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 KDELC2Q7Z4H8 507 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 GALNT13Q8IUC8 556 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 TMEM132CQ8N3T6 1108 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 OR52L2PQ8NGH6 319 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 GLMPQ8WWB7 406 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 SOCS4Q8WXH5 440 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 KCNJ9Q92806 393 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 ARHGEF2Q92974 986 aaKnown RBP6.23□□□□□ -1.41
SCFD1-208ENST00000553278 KLHL29Q96CT2 875 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 RNF31Q96EP0 1072 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 TRMT61AQ96FX7 289 aaKnown RBP6.23□□□□□ -1.41
SCFD1-208ENST00000553278 WDYHV1Q96HA8 205 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 MNTQ99583 582 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 OR10A4Q9H209 315 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 KAT14Q9H8E8 782 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 ZFP64Q9NPA5 681 aa6.23□□□□□ -1.41
SCFD1-208ENST00000553278 CCDC177Q9NQR7 707 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-208ENST00000553278 ARGLU1Q9NWB6 273 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-208ENST00000553278 TRGV11A0A075B6L2 103 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 CYP3A7-CYP3A51PA0A087WV96 503 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 TEX13CA0A0J9YWL9 993 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 TCAF2A6NFQ2 919 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 FYB1O15117 783 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 BCAT2O15382 392 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-208ENST00000553278 TBCAO75347 108 aaKnown RBP6.22□□□□□ -1.41
SCFD1-208ENST00000553278 RPS6KA4O75676 772 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 ZFPL1O95159 310 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 EIF2S1P05198 315 aaKnown RBP6.22□□□□□ -1.41
SCFD1-208ENST00000553278 MED14OSP0DP75 135 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 CREB1P16220 341 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 CYP3A7P24462 503 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 OAS2P29728 719 aaKnown RBP6.22□□□□□ -1.41
SCFD1-208ENST00000553278 CXCR5P32302 372 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 HNF1BP35680 557 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 LIPAP38571 399 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 DPP6P42658 865 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 MVDP53602 400 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 RABGGTBP53611 331 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 EPHB4P54760 987 aa6.22□□□□□ -1.41
SCFD1-208ENST00000553278 ARHGAP8P85298 464 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 5686.3 ms