RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	KLHDC10	Q6PID8	442 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	LRIG3	Q6UXM1	1119 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	B4GALNT4	Q76KP1	1039 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	TMC7	Q7Z402	723 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	ITIH5	Q86UX2	942 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	HOOK3	Q86VS8	718 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	PPIL6	Q8IXY8	311 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	IQCK	Q8N0W5	287 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	ZCCHC9	Q8N567	271 aa	Known RBP	13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	BTN2A3P	Q96KV6	586 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	ZNF512	Q96ME7	567 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	KLHL5	Q96PQ7	755 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	RUFY1	Q96T51	708 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	BRD8	Q9H0E9	1235 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	SIK2	Q9H0K1	926 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	CATSPERB	Q9H7T0	1116 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	TRPM5	Q9NZQ8	1165 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	UXT	Q9UBK9	157 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	DNMT3L	Q9UJW3	386 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	IRAK3	Q9Y616	596 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	HS3ST4	Q9Y661	456 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	LINC01553	A4QN01	128 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	C5orf60	A6NFR6	353 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480		E9PAM4	449 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	TGM5	O43548	720 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	GCAT	O75600	419 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	ADH1A	P07327	375 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	VAV1	P15498	845 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	ATP5C1	P36542	298 aa	Known RBP	13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	GGCX	P38435	758 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	MLLT6	P55198	1093 aa	Predicted RBP	13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	UBE3A	Q05086	875 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	HECTD3	Q5T447	861 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	ARTN	Q5T4W7	220 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	PIK3R6	Q5UE93	754 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	NUGGC	Q68CJ6	796 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	HEATR6	Q6AI08	1181 aa	Known RBP	13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	MIB1	Q86YT6	1006 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	HTR3C	Q8WXA8	447 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	CPT1B	Q92523	772 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	PRCC	Q92733	491 aa	Predicted RBP	13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	PSMG2	Q969U7	264 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	ZIM3	Q96PE6	472 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	FERMT1	Q9BQL6	677 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	EMILIN2	Q9BXX0	1053 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	MED4	Q9NPJ6	270 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	ENTPD7	Q9NQZ7	604 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	XPO7	Q9UIA9	1087 aa	Known RBP	13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	PLAA	Q9Y263	795 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	ASB3	Q9Y575	518 aa		13.08	□□□□□ -0.32
CACNB3-223	ENST00000552480	WASH4P	A8MWX3	477 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	C5orf67	F2Z3F1	127 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	AGPS	O00116	658 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	STK10	O94804	968 aa	Known RBP	13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	SRGAP2B	P0DMP2	458 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	MX2	P20592	715 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	FAM193A	P78312	1265 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	GALNT2	Q10471	571 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	HSP90B2P	Q58FF3	399 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	MS4A13	Q5J8X5	152 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	RWDD4	Q6NW29	188 aa	Known RBP	13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	LILRA6	Q6PI73	481 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	CCDC149	Q6ZUS6	474 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	CCDC25	Q86WR0	208 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	RELL1	Q8IUW5	271 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	LZTR1	Q8N653	840 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	NPW	Q8N729	165 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	NAT8L	Q8N9F0	302 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	LGMN	Q99538	433 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	TCF25	Q9BQ70	676 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	PHACTR1	Q9C0D0	580 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	PABPC3	Q9H361	631 aa	Known RBP	13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	PRDM12	Q9H4Q4	367 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480	CLUH	O75153	1309 aa		13.07	□□□□□ -0.32
CACNB3-223	ENST00000552480		A0A0A0MRY4	1105 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	SPDYE4	A6NLX3	237 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480		H0YGN5	161 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480		H3BQF6	201 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	CHAD	O15335	359 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	COCH	O43405	550 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	OPA1	O60313	960 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	RB1	P06400	928 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	HMBS	P08397	361 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	NUDT17	P0C025	328 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	NRL	P54845	237 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	ERVFC1	P60507	584 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	BASP1	P80723	227 aa	Known RBP	13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	COG7	P83436	770 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	PPID	Q08752	370 aa	Known RBP	13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	AP1B1	Q10567	949 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	KCNJ11	Q14654	390 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	PLPP4	Q5VZY2	271 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	LRRC31	Q6UY01	552 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	C14orf80	Q86SX3	495 aa		13.06	□□□□□ -0.32
CACNB3-223	ENST00000552480	ZNF683	Q8IZ20	524 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms