RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 ACAP1Q15027 740 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 MPP7Q5T2T1 576 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 ACBD5Q5T8D3 534 aaPredicted RBP13.58□□□□□ -0.24
CDK4-212ENST00000552388 RAP1GAP2Q684P5 730 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 RNF43Q68DV7 783 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 RFWD3Q6PCD5 774 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 CHSY1Q86X52 802 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 CCDC105Q8IYK2 499 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 FLCNQ8NFG4 579 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 PJA1Q8NG27 643 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 DDI1Q8WTU0 396 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 NTAN1Q96AB6 310 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 TMA16Q96EY4 203 aaKnown RBP13.58□□□□□ -0.24
CDK4-212ENST00000552388 C1orf74Q96LT6 269 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 PRICKLE1Q96MT3 831 aaPredicted RBP13.58□□□□□ -0.24
CDK4-212ENST00000552388 HAPLN3Q96S86 360 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 PNKPQ96T60 521 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 EIF3CQ99613 913 aaKnown RBP13.58□□□□□ -0.24
CDK4-212ENST00000552388 FBRSL1Q9HCM7 1045 aaKnown RBP13.58□□□□□ -0.24
CDK4-212ENST00000552388 PLK2Q9NYY3 685 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 UVRAGQ9P2Y5 699 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 FBXO10Q9UK96 956 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 HS3ST4Q9Y661 456 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 CHD5Q8TDI0 1954 aa13.58□□□□□ -0.24
CDK4-212ENST00000552388 MYO18AQ92614 2054 aaKnown RBP13.57□□□□□ -0.24
CDK4-212ENST00000552388 A0A0A0MRY4 1105 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 FAM170BA6NMN3 283 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 F5H5T6 163 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 STK25O00506 426 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 NCAM2O15394 837 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 TSPAN3O60637 253 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 NDUFA10O95299 355 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 CHRNB1P11230 501 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 DRD1P21728 446 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 HOXD9P28356 352 aaPredicted RBP13.57□□□□□ -0.24
CDK4-212ENST00000552388 ADRA1BP35368 520 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 MAGEA1P43355 309 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 SGSHP51688 502 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 AIF1P55008 147 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 AUHQ13825 339 aaKnown RBP13.57□□□□□ -0.24
CDK4-212ENST00000552388 CCINQ13939 588 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 UBXN2BQ14CS0 331 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 TCEAL1Q15170 157 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 SPA17Q15506 151 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 ARL13BQ3SXY8 428 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 C5orf22Q49AR2 442 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 NAIF1Q69YI7 327 aaPredicted RBP13.57□□□□□ -0.24
CDK4-212ENST00000552388 FSTL4Q6MZW2 842 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 RAD9BQ6WBX8 426 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 PHTF2Q8N3S3 785 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 NAT16Q8N8M0 369 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 HJURPQ8NCD3 748 aaPredicted RBP13.57□□□□□ -0.24
CDK4-212ENST00000552388 ZNF564Q8TBZ8 553 aaPredicted RBP13.57□□□□□ -0.24
CDK4-212ENST00000552388 CLDN23Q96B33 292 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 NCAPGQ9BPX3 1015 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 SLC2A11Q9BYW1 496 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 TMPRSS4Q9NRS4 437 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 DEC1Q9P2X7 70 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 ANAPC7Q9UJX3 599 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 NDRG2Q9UN36 371 aaKnown RBP13.57□□□□□ -0.24
CDK4-212ENST00000552388 SIT1Q9Y3P8 196 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 MTF2Q9Y483 593 aaPredicted RBP13.57□□□□□ -0.24
CDK4-212ENST00000552388 ZNF292O60281 2723 aa13.57□□□□□ -0.24
CDK4-212ENST00000552388 PTPRZ1P23471 2315 aaPredicted RBP13.56□□□□□ -0.24
CDK4-212ENST00000552388 TYW5A2RUC4 315 aaKnown RBP13.56□□□□□ -0.24
CDK4-212ENST00000552388 RNF8O76064 485 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 CISD3P0C7P0 127 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 RPS24P62847 133 aaKnown RBP13.56□□□□□ -0.24
CDK4-212ENST00000552388 NRG1Q02297 640 aaPredicted RBP13.56□□□□□ -0.24
CDK4-212ENST00000552388 SCAPQ12770 1279 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 GRSF1Q12849 480 aaKnown RBP eCLIP13.56□□□□□ -0.24
CDK4-212ENST00000552388 PIGHQ14442 188 aaPredicted RBP13.56□□□□□ -0.24
CDK4-212ENST00000552388 GSE1Q14687 1217 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 PREPLQ4J6C6 727 aaPredicted RBP13.56□□□□□ -0.24
CDK4-212ENST00000552388 DGKKQ5KSL6 1271 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 TTC39BQ5VTQ0 682 aaPredicted RBP13.56□□□□□ -0.24
CDK4-212ENST00000552388 FBXL22Q6P050 247 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 RHOT2Q8IXI1 618 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 LGI2Q8N0V4 545 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 SYNPOQ8N3V7 929 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 ARFGAP1Q8N6T3 406 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 CCDC185Q8N715 623 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 NIPA2Q8N8Q9 360 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 ZNF557Q8N988 423 aaPredicted RBP13.56□□□□□ -0.24
CDK4-212ENST00000552388 EZH1Q92800 747 aaPredicted RBP13.56□□□□□ -0.24
CDK4-212ENST00000552388 BHMTQ93088 406 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 MYEOVQ96EZ4 313 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 SIK2Q9H0K1 926 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 OSBPL2Q9H1P3 480 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 LUC7LQ9NQ29 371 aaKnown RBP13.56□□□□□ -0.24
CDK4-212ENST00000552388 DNAJC17Q9NVM6 304 aaKnown RBP13.56□□□□□ -0.24
CDK4-212ENST00000552388 CTTNBP2NLQ9P2B4 639 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 IP6K2Q9UHH9 426 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 VANGL2Q9ULK5 521 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 SLC27A6Q9Y2P4 619 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 PCDHA13Q9Y5I0 950 aa13.56□□□□□ -0.24
CDK4-212ENST00000552388 MYO1FO00160 1098 aa13.55□□□□□ -0.24
CDK4-212ENST00000552388 PI15O43692 258 aa13.55□□□□□ -0.24
CDK4-212ENST00000552388 TBL1XO60907 577 aa13.55□□□□□ -0.24
CDK4-212ENST00000552388 LRCH4O75427 683 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms