RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 C6orf118Q5T5N4 469 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 KIAA0895LQ68EN5 471 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 USP30Q70CQ3 517 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 KIAA0907Q7Z7F0 614 aaPredicted RBP14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 SIX6OS1Q8N1H7 587 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 FBXL13Q8NEE6 735 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 IRX2Q9BZI1 471 aaPredicted RBP14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 HESX1Q9UBX0 185 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 PCDHGA1Q9Y5H4 931 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 ASXL3Q9C0F0 2248 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 A0A1B0GTQ1 180 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 PLK4O00444 970 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 F13A1P00488 732 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 C1SP09871 688 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 JUPP14923 745 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 ABCB4P21439 1286 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 MXI1P50539 228 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 ADIGQ0VDE8 80 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 BST2Q10589 180 aaKnown RBP14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 ADAM9Q13443 819 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 MPP7Q5T2T1 576 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 BSPRYQ5W0U4 402 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 EDEM1Q92611 657 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 RSPH9Q9H1X1 276 aaPredicted RBP14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 PABPC3Q9H361 631 aaKnown RBP14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 ABCC13Q9NSE7 274 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 SFMBT1Q9UHJ3 866 aa14.77□□□□□ -0.05
CHMP1A-210ENST00000551981 SHROOM3Q8TF72 1996 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 A0A1W2PPC4 97 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 FAM47DPA6NHR8 397 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 LRRC72A6NJI9 287 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 ENC1O14682 589 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 YKT6O15498 198 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 IRAK2O43187 625 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 IGHV4-34P06331 123 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 ITGAVP06756 1048 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 PFKFB1P16118 471 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 SLC11A2P49281 568 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 C19orf57Q0VDD7 668 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 SGO2Q562F6 1265 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 KCNT1Q5JUK3 1230 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 LRRC69Q6ZNQ3 347 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 BHLHA9Q7RTU4 235 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 PIP4K2CQ8TBX8 421 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 NDRG1Q92597 394 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 SEMA4DQ92854 862 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 CNDP2Q96KP4 475 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 SLC6A18Q96N87 628 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 ELF4Q99607 663 aaPredicted RBP14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 ORAI3Q9BRQ5 295 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 ASH1LQ9NR48 2969 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 RAB20Q9NX57 234 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 FBXL12Q9NXK8 326 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 TSPAN16Q9UKR8 245 aa14.76□□□□□ -0.05
CHMP1A-210ENST00000551981 TYW5A2RUC4 315 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 YJEFN3A6XGL0 299 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 E7ENQ6 273 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 TULP2O00295 520 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 MSI1O43347 362 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 TBL1XO60907 577 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 RFPL3O75679 317 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 RHOBTB3O94955 611 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 LDOC1O95751 146 aaPredicted RBP14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 ASLP04424 464 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 CD70P32970 193 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 YWHAEP62258 255 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 NUGGCQ68CJ6 796 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 GATAD2AQ86YP4 633 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 MFN1Q8IWA4 741 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 CCDC117Q8IWD4 279 aaPredicted RBP14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 UNC45BQ8IWX7 931 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 ZC3H3Q8IXZ2 948 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 GUF1Q8N442 669 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 TATDN2Q93075 761 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 CRELD1Q96HD1 420 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 OMDQ99983 421 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 CNGB3Q9NQW8 809 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 GDF3Q9NR23 364 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 AASDHPPTQ9NRN7 309 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 RCOR1Q9UKL0 485 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 MAPK8IP1Q9UQF2 711 aa14.75□□□□□ -0.05
CHMP1A-210ENST00000551981 A0A1B0GVL5 298 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 TK2O00142 265 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 RRP8O43159 456 aaKnown RBP14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 RNASEH2AO75792 299 aaKnown RBP14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 HSP90AA1P07900 732 aaKnown RBP14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 SETSIPP0DME0 302 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 CD19P15391 556 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 CMA1P23946 247 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 CD38P28907 300 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 ARRB1P49407 418 aaPredicted RBP14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 SGSHP51688 502 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 GALCP54803 685 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 MCCD1P59942 119 aaPredicted RBP14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 HNRNPA1L2Q32P51 320 aaKnown RBP14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 SLC45A4Q5BKX6 768 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 PIK3R6Q5UE93 754 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 RFWD3Q6PCD5 774 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 NCEH1Q6PIU2 408 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 SCML4Q8N228 414 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms