RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 PLEKHA7Q6IQ23 1121 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 RFWD3Q6PCD5 774 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 GPR161Q8N6U8 529 aaKnown RBP11□□□□□ -0.65
PTCH1-225ENST00000551845 SUMF1Q8NBK3 374 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 JOSD2Q8TAC2 188 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 KCNV2Q8TDN2 545 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 SPOCK2Q92563 424 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 C1orf74Q96LT6 269 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 CCDC42Q96M95 316 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 PIGVQ9NUD9 493 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 ARHGEF38Q9NXL2 777 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 CNOT8Q9UFF9 292 aaKnown RBP11□□□□□ -0.65
PTCH1-225ENST00000551845 EP300Q09472 2414 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-225ENST00000551845 FANCMQ8IYD8 2048 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 DMXL1Q9Y485 3027 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 ZNF292O60281 2723 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 TCRBV5S1A1TA0A578 114 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 DCDC2BA2VCK2 349 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 CHURC1-FNTBB4DL54 471 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 F5H5T6 163 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 GFRA2O00451 464 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 TRIM24O15164 1050 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 TIMM44O43615 452 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 MFAP3LO75121 409 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 RNF40O75150 1001 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 PAGE1O75459 146 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 GJB6O95452 261 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 TFE3P19532 575 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-225ENST00000551845 TACR2P21452 398 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 CCR3P51677 355 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 ZNF143P52747 638 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-225ENST00000551845 RPL7AP62424 266 aaKnown RBP10.99□□□□□ -0.65
PTCH1-225ENST00000551845 E2F5Q15329 346 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 CDO1Q16878 200 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 C2orf27AQ580R0 203 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 C10orf76Q5T2E6 689 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 RAP1GAP2Q684P5 730 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 SDE2Q6IQ49 451 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 TRNP1Q6NT89 227 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 LRRC31Q6UY01 552 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 STRADAQ7RTN6 431 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 CHSY1Q86X52 802 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 LGI2Q8N0V4 545 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 HJURPQ8NCD3 748 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-225ENST00000551845 OLIG1Q8TAK6 271 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 UCMAQ8WVF2 138 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 CENPIQ92674 756 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-225ENST00000551845 ZNF653Q96CK0 615 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 MCEEQ96PE7 176 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 HAPLN3Q96S86 360 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 SIK2Q9H0K1 926 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 CALCOCO1Q9P1Z2 691 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 STIM2Q9P246 746 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 MYO1AQ9UBC5 1043 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 XPO7Q9UIA9 1087 aaKnown RBP10.99□□□□□ -0.65
PTCH1-225ENST00000551845 USP18Q9UMW8 372 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 SLC27A6Q9Y2P4 619 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 STARD13Q9Y3M8 1113 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 SCINQ9Y6U3 715 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 MYH10P35580 1976 aa10.99□□□□□ -0.65
PTCH1-225ENST00000551845 TMEM191CA6NGB0 347 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 PRR5-ARHGAP8B1AHC4 643 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 H0Y626 953 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 ADCY5O95622 1261 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 ADRA1BP35368 520 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 TIE1P35590 1138 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 SEC13P55735 322 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 RPS24P62847 133 aaKnown RBP10.98□□□□□ -0.65
PTCH1-225ENST00000551845 ARHGAP8P85298 464 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 CSTF1Q05048 431 aaKnown RBP10.98□□□□□ -0.65
PTCH1-225ENST00000551845 KDSRQ06136 332 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 GFPT1Q06210 699 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-225ENST00000551845 AUHQ13825 339 aaKnown RBP10.98□□□□□ -0.65
PTCH1-225ENST00000551845 GAS6Q14393 721 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 SLC18A3Q16572 532 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 C15orf59Q2T9L4 293 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-225ENST00000551845 HSF5Q4G112 596 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-225ENST00000551845 RABGAP1LQ5R372 815 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 PPP1R15BQ5SWA1 713 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 SH3PXD2AQ5TCZ1 1133 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 EMC10Q5UCC4 262 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 FBXL22Q6P050 247 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 SCYL2Q6P3W7 929 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 Q6ZS52 159 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 BNIPLQ7Z465 357 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 FAM131BQ86XD5 332 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 DNAAF5Q86Y56 855 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 MFN1Q8IWA4 741 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 CFAP52Q8N1V2 620 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 PHTF2Q8N3S3 785 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 CARNMT1Q8N4J0 409 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 TERB1Q8NA31 727 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 RPLP0P6Q8NHW5 317 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 FIBINQ8TAL6 211 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 USP33Q8TEY7 942 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 FAM172AQ8WUF8 416 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 EZH1Q92800 747 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-225ENST00000551845 ACDQ96AP0 544 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 PPP1R9BQ96SB3 815 aa10.98□□□□□ -0.65
PTCH1-225ENST00000551845 CHP1Q99653 195 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms