RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 RPS24P62847 133 aaKnown RBP19.67■□□□□ 0.74
DDX54-208ENST00000551344 NOMO3P69849 1222 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 ZNF234Q14588 700 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 SPDYCQ5MJ68 293 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 PMS2CLQ68D20 193 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 TRIM72Q6ZMU5 477 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 XYLT1Q86Y38 959 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 MFN1Q8IWA4 741 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 RLN3Q8WXF3 142 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 CPA5Q8WXQ8 436 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 NT5C3BQ969T7 300 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 PRICKLE1Q96MT3 831 aaPredicted RBP19.67■□□□□ 0.74
DDX54-208ENST00000551344 NPY6RQ99463 290 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 XPO7Q9UIA9 1087 aaKnown RBP19.67■□□□□ 0.74
DDX54-208ENST00000551344 STAP1Q9ULZ2 295 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 RAD54BQ9Y620 910 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 ABCA7Q8IZY2 2146 aa19.67■□□□□ 0.74
DDX54-208ENST00000551344 SPTBN4Q9H254 2564 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 M0QYT0 321 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 MAP3K13O43283 966 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 SYNCRIPO60506 623 aaKnown RBP19.66■□□□□ 0.74
DDX54-208ENST00000551344 F9P00740 461 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 ZNF806P0C7X5 589 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 CHRNB2P17787 502 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 RNASE9P60153 205 aaKnown RBP19.66■□□□□ 0.74
DDX54-208ENST00000551344 FMO1Q01740 532 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 FILIP1LQ4L180 1135 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 NAA35Q5VZE5 725 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 RAP1GAP2Q684P5 730 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 MBLAC2Q68D91 279 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 ARCQ7LC44 396 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 CHSY1Q86X52 802 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 LGI2Q8N0V4 545 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 SLC20A1Q8WUM9 679 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 SORCS1Q8WY21 1168 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 MYEOVQ96EZ4 313 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 LMLNQ96KR4 655 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 MRGPRX1Q96LB2 322 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 RTN4Q9NQC3 1192 aaKnown RBP19.66■□□□□ 0.74
DDX54-208ENST00000551344 CALCOCO1Q9P1Z2 691 aa19.66■□□□□ 0.74
DDX54-208ENST00000551344 SYNJ2BP-COX16A0A087WUM0 186 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 F5H5T6 163 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 DLDP09622 509 aaKnown RBP19.65■□□□□ 0.74
DDX54-208ENST00000551344 CCDC172P0C7W6 258 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 POLR2EP19388 210 aaKnown RBP19.65■□□□□ 0.74
DDX54-208ENST00000551344 NDUFV2P19404 249 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 BCKDHBP21953 392 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 CD70P32970 193 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 NME3Q13232 169 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 PLA2G2CQ5R387 149 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 FAM102AQ5T9C2 384 aaPredicted RBP19.65■□□□□ 0.74
DDX54-208ENST00000551344 SERPINA13PQ6UXR4 307 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 SLC36A4Q6YBV0 504 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 PRR23CQ6ZRP0 262 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 LPCAT2Q7L5N7 544 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 METTL3Q86U44 580 aaKnown RBP19.65■□□□□ 0.74
DDX54-208ENST00000551344 CFAP52Q8N1V2 620 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 CARNMT1Q8N4J0 409 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 WFDC5Q8TCV5 224 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 PGAP3Q96FM1 320 aaPredicted RBP19.65■□□□□ 0.74
DDX54-208ENST00000551344 PRMT1Q99873 361 aaKnown RBP19.65■□□□□ 0.74
DDX54-208ENST00000551344 COX16Q9P0S2 106 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 KIAA1522Q9P206 1035 aaPredicted RBP19.65■□□□□ 0.74
DDX54-208ENST00000551344 PAXBP1Q9Y5B6 917 aa19.65■□□□□ 0.74
DDX54-208ENST00000551344 BCLAF3A2AJT9 711 aaKnown RBP19.64■□□□□ 0.73
DDX54-208ENST00000551344 TEX33O43247 280 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 LUC7L3O95232 432 aaKnown RBP19.64■□□□□ 0.73
DDX54-208ENST00000551344 MMP8P22894 467 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 MPLP40238 635 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 CDH18Q13634 790 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 IQCB1Q15051 598 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 SLC25A52Q3SY17 297 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 FUT11Q495W5 492 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 BRMS1LQ5PSV4 323 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 TTC39BQ5VTQ0 682 aaPredicted RBP19.64■□□□□ 0.73
DDX54-208ENST00000551344 SND1Q7KZF4 910 aaKnown RBP eCLIP19.64■□□□□ 0.73
DDX54-208ENST00000551344 TTC17Q96AE7 1141 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 RMDN1Q96DB5 314 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 TMEM245Q9H330 911 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 WDCPQ9H6R7 721 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 VPS45Q9NRW7 570 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 MBD1Q9UIS9 605 aaPredicted RBP19.64■□□□□ 0.73
DDX54-208ENST00000551344 TMEM59LQ9UK28 342 aa19.64■□□□□ 0.73
DDX54-208ENST00000551344 CEP250Q9BV73 2442 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 RALGAPA1Q6GYQ0 2036 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 SYCE3A1L190 88 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 H0Y626 953 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 CAVIN2O95810 425 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 EPHX1P07099 455 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 UNGP13051 313 aaPredicted RBP19.63■□□□□ 0.73
DDX54-208ENST00000551344 CXCR3P49682 368 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 CREB5Q02930 508 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 LMAN2Q12907 356 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 PUM1Q14671 1186 aaKnown RBP eCLIP19.63■□□□□ 0.731e-7■■■■■ 30.7
DDX54-208ENST00000551344 PTPRNQ16849 979 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 C2CD6Q53TS8 623 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 RABGAP1LQ5R372 815 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 ACBD5Q5T8D3 534 aaPredicted RBP19.63■□□□□ 0.73
DDX54-208ENST00000551344 TMPRSS6Q8IU80 811 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 FRMD1Q8N878 549 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms