RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CALCAP01258 141 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 SERPINF2P08697 491 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 SETSIPP0DME0 302 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 BRD2P25440 801 aaKnown RBP13.96□□□□□ -0.17
NUP188-211ENST00000550219 MAOBP27338 520 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 CD6P30203 668 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 CASP14P31944 242 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 SOX5P35711 763 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 RAPGEF1Q13905 1077 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 ARHGAP44Q17R89 818 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 PLEKHG6Q3KR16 790 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 BSPRYQ5W0U4 402 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 PM20D1Q6GTS8 502 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 SERPINA13PQ6UXR4 307 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 SYN2Q92777 582 aaPredicted RBP13.96□□□□□ -0.17
NUP188-211ENST00000550219 TOE1Q96GM8 510 aaKnown RBP13.96□□□□□ -0.17
NUP188-211ENST00000550219 SPAG5Q96R06 1193 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 GPR174Q9BXC1 333 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 MKRN2Q9H000 416 aaKnown RBP13.96□□□□□ -0.17
NUP188-211ENST00000550219 NUCKS1Q9H1E3 243 aaKnown RBP13.96□□□□□ -0.17
NUP188-211ENST00000550219 CAPN10Q9HC96 672 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 ELOVL2Q9NXB9 296 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 AIPL1Q9NZN9 384 aa13.96□□□□□ -0.17
NUP188-211ENST00000550219 THAP10Q9P2Z0 257 aaPredicted RBP13.96□□□□□ -0.17
NUP188-211ENST00000550219 ADAMTS9Q9P2N4 1935 aa13.96□□□□□ -0.18
NUP188-211ENST00000550219 PCDH15Q96QU1 1955 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 C1QTNF9BB2RNN3 333 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 OPHN1O60890 802 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 MFAP3LO75121 409 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 EPHX1P07099 455 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 C1QTNF9P0C862 333 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 ACADMP11310 421 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 NCAM1P13591 858 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 HLA-EP13747 358 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 HOXD9P28356 352 aaPredicted RBP13.95□□□□□ -0.18
NUP188-211ENST00000550219 HNRNPH3P31942 346 aaKnown RBP13.95□□□□□ -0.18
NUP188-211ENST00000550219 STAT1P42224 750 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 DAOAP59103 153 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 EIF4HQ15056 248 aaKnown RBP13.95□□□□□ -0.18
NUP188-211ENST00000550219 TRIP4Q15650 581 aaPredicted RBP13.95□□□□□ -0.18
NUP188-211ENST00000550219 FNDC3BQ53EP0 1204 aaKnown RBP13.95□□□□□ -0.18
NUP188-211ENST00000550219 MPPE1Q53F39 396 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 SYCP2LQ5T4T6 812 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 DRC7Q8IY82 874 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 ZCCHC9Q8N567 271 aaKnown RBP13.95□□□□□ -0.18
NUP188-211ENST00000550219 ZNF366Q8N895 744 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 ZNF397Q8NF99 534 aaPredicted RBP13.95□□□□□ -0.18
NUP188-211ENST00000550219 CPLX3Q8WVH0 158 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 TFAP2BQ92481 460 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 ANP32BQ92688 251 aaKnown RBP13.95□□□□□ -0.18
NUP188-211ENST00000550219 PRCCQ92733 491 aaPredicted RBP13.95□□□□□ -0.18
NUP188-211ENST00000550219 SIPA1Q96FS4 1042 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 PIWIL1Q96J94 861 aaKnown RBP13.95□□□□□ -0.18
NUP188-211ENST00000550219 DNAJC7Q99615 494 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 MIR1-1HGQ9H1L0 117 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 HBS1LQ9Y450 684 aaKnown RBP13.95□□□□□ -0.18
NUP188-211ENST00000550219 CEP192Q8TEP8 1941 aa13.95□□□□□ -0.18
NUP188-211ENST00000550219 MYO18AQ92614 2054 aaKnown RBP13.94□□□□□ -0.18
NUP188-211ENST00000550219 LRRC53A6NM62 1247 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 AKR1B15C9JRZ8 316 aaPredicted RBP13.94□□□□□ -0.18
NUP188-211ENST00000550219 ARHGAP33O14559 1287 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 NPC1O15118 1278 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 SYPP08247 313 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 PAEPP09466 180 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 TPM1P09493 284 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 PNMA6AP0CW24 399 aaPredicted RBP13.94□□□□□ -0.18
NUP188-211ENST00000550219 GNSP15586 552 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 CLCN1P35523 988 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 KRT9P35527 623 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 SGSHP51688 502 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 SIM1P81133 766 aaPredicted RBP13.94□□□□□ -0.18
NUP188-211ENST00000550219 WDR45BQ5MNZ6 344 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 E4F1Q66K89 784 aaPredicted RBP13.94□□□□□ -0.18
NUP188-211ENST00000550219 TMEM215Q68D42 235 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 UNQ6494/PRO21346Q6UXR6 183 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 CHST9Q7L1S5 443 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 IRF2BP2Q7Z5L9 587 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 FAM124AQ86V42 546 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 TMPRSS6Q8IU80 811 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 CNGA4Q8IV77 575 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 FAM217AQ8IXS0 508 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 TC2NQ8N9U0 490 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 SPC24Q8NBT2 197 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 RBBP8NLQ8NC74 664 aaPredicted RBP13.94□□□□□ -0.18
NUP188-211ENST00000550219 OR8K1Q8NGG5 319 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 CLEC4CQ8WTT0 213 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 CYB5D2Q8WUJ1 264 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 KCTD13Q8WZ19 329 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 SNX19Q92543 992 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 FOXJ1Q92949 421 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 SLC2A11Q9BYW1 496 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 ADAM33Q9BZ11 813 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 MIS12Q9H081 205 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 CNGB3Q9NQW8 809 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 ABCC13Q9NSE7 274 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 ABCB8Q9NUT2 735 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 USP36Q9P275 1121 aaKnown RBP13.94□□□□□ -0.18
NUP188-211ENST00000550219 SUSD2Q9UGT4 822 aa13.94□□□□□ -0.18
NUP188-211ENST00000550219 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.94□□□□□ -0.18
NUP188-211ENST00000550219 MUC22E2RYF6 1773 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms