RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 RNF40O75150 1001 aa23.31■■□□□ 1.32
BRF1-216ENST00000550208 CYP1A2P05177 515 aa23.31■■□□□ 1.32
BRF1-216ENST00000550208 TNFRSF4P43489 277 aa23.31■■□□□ 1.32
BRF1-216ENST00000550208 SEC13P55735 322 aa23.31■■□□□ 1.32
BRF1-216ENST00000550208 FBXO43Q4G163 708 aa23.31■■□□□ 1.32
BRF1-216ENST00000550208 MPP7Q5T2T1 576 aa23.31■■□□□ 1.32
BRF1-216ENST00000550208 FBXL22Q6P050 247 aa23.31■■□□□ 1.32
BRF1-216ENST00000550208 PKN3Q6P5Z2 889 aa23.31■■□□□ 1.32
BRF1-216ENST00000550208 SPC24Q8NBT2 197 aa23.31■■□□□ 1.32
BRF1-216ENST00000550208 HJURPQ8NCD3 748 aaPredicted RBP23.31■■□□□ 1.32
BRF1-216ENST00000550208 PACSIN1Q9BY11 444 aa23.31■■□□□ 1.32
BRF1-216ENST00000550208 MRPL47Q9HD33 250 aaKnown RBP23.31■■□□□ 1.32
BRF1-216ENST00000550208 SPATA6Q9NWH7 488 aaPredicted RBP23.31■■□□□ 1.32
BRF1-216ENST00000550208 SCINQ9Y6U3 715 aa23.31■■□□□ 1.32
BRF1-216ENST00000550208 PSMA2P25787 234 aa23.3■■□□□ 1.32
BRF1-216ENST00000550208 ADRA1BP35368 520 aa23.3■■□□□ 1.32
BRF1-216ENST00000550208 MTA1Q13330 715 aa23.3■■□□□ 1.32
BRF1-216ENST00000550208 PREPLQ4J6C6 727 aaPredicted RBP23.3■■□□□ 1.32
BRF1-216ENST00000550208 TERB1Q8NA31 727 aa23.3■■□□□ 1.32
BRF1-216ENST00000550208 IGSF8Q969P0 613 aa23.3■■□□□ 1.32
BRF1-216ENST00000550208 PANX2Q96RD6 677 aa23.3■■□□□ 1.32
BRF1-216ENST00000550208 SLC2A11Q9BYW1 496 aa23.3■■□□□ 1.32
BRF1-216ENST00000550208 MAGEB5Q9BZ81 275 aa23.3■■□□□ 1.32
BRF1-216ENST00000550208 VANGL2Q9ULK5 521 aa23.3■■□□□ 1.32
BRF1-216ENST00000550208 SLC27A6Q9Y2P4 619 aa23.3■■□□□ 1.32
BRF1-216ENST00000550208 ZNF318Q5VUA4 2279 aa23.3■■□□□ 1.32
BRF1-216ENST00000550208 PRRT4C9JH25 899 aa23.29■■□□□ 1.32
BRF1-216ENST00000550208 GALR2O43603 387 aaPredicted RBP23.29■■□□□ 1.32
BRF1-216ENST00000550208 ZNF252P-AS1Q0IIN9 211 aa23.29■■□□□ 1.32
BRF1-216ENST00000550208 C2orf27AQ580R0 203 aa23.29■■□□□ 1.32
BRF1-216ENST00000550208 RNF43Q68DV7 783 aa23.29■■□□□ 1.32
BRF1-216ENST00000550208 SCYL2Q6P3W7 929 aa23.29■■□□□ 1.32
BRF1-216ENST00000550208 CCDC185Q8N715 623 aa23.29■■□□□ 1.32
BRF1-216ENST00000550208 WFDC5Q8TCV5 224 aa23.29■■□□□ 1.32
BRF1-216ENST00000550208 C1orf74Q96LT6 269 aa23.29■■□□□ 1.32
BRF1-216ENST00000550208 HAPLN3Q96S86 360 aa23.29■■□□□ 1.32
BRF1-216ENST00000550208 C2orf42Q9NWW7 574 aa23.29■■□□□ 1.32
BRF1-216ENST00000550208 HCN2Q9UL51 889 aa23.29■■□□□ 1.32
BRF1-216ENST00000550208 H2AFZP0C0S5 128 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 NUBP1P53384 320 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 GEN1Q17RS7 908 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 C10orf76Q5T2E6 689 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 H2AFVQ71UI9 128 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 C1orf210Q8IVY1 113 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 CARNMT1Q8N4J0 409 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 SPEM1Q8N4L4 309 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 ARFGAP1Q8N6T3 406 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 RPLP0P6Q8NHW5 317 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 USP33Q8TEY7 942 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 RPRD1AQ96P16 312 aaPredicted RBP23.28■■□□□ 1.32
BRF1-216ENST00000550208 NUP85Q9BW27 656 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 POLR3BQ9NW08 1133 aaPredicted RBP23.28■■□□□ 1.32
BRF1-216ENST00000550208 IMPACTQ9P2X3 320 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 KIAA1549LQ6ZVL6 1849 aa23.28■■□□□ 1.32
BRF1-216ENST00000550208 TYW5A2RUC4 315 aaKnown RBP23.27■■□□□ 1.32
BRF1-216ENST00000550208 CHRM1P11229 460 aaPredicted RBP23.27■■□□□ 1.32
BRF1-216ENST00000550208 HLA-FP30511 346 aa23.27■■□□□ 1.32
BRF1-216ENST00000550208 TIE1P35590 1138 aa23.27■■□□□ 1.32
BRF1-216ENST00000550208 KIR2DL1P43626 348 aaPredicted RBP23.27■■□□□ 1.32
BRF1-216ENST00000550208 IRAK1P51617 712 aa23.27■■□□□ 1.32
BRF1-216ENST00000550208 ARL13BQ3SXY8 428 aa23.27■■□□□ 1.32
BRF1-216ENST00000550208 C5orf22Q49AR2 442 aa23.27■■□□□ 1.32
BRF1-216ENST00000550208 RABGAP1LQ5R372 815 aa23.27■■□□□ 1.32
BRF1-216ENST00000550208 ARTNQ5T4W7 220 aa23.27■■□□□ 1.32
BRF1-216ENST00000550208 NUDT18Q6ZVK8 323 aa23.27■■□□□ 1.32
BRF1-216ENST00000550208 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.27■■□□□ 1.32
BRF1-216ENST00000550208 CIR1Q86X95 450 aaPredicted RBP23.27■■□□□ 1.32
BRF1-216ENST00000550208 ZNF683Q8IZ20 524 aa23.27■■□□□ 1.32
BRF1-216ENST00000550208 FIBINQ8TAL6 211 aa23.27■■□□□ 1.32
BRF1-216ENST00000550208 FNIP1Q8TF40 1166 aa23.27■■□□□ 1.32
BRF1-216ENST00000550208 BTBD6Q96KE9 485 aa23.27■■□□□ 1.32
BRF1-216ENST00000550208 ZDHHC4Q9NPG8 344 aa23.27■■□□□ 1.32
BRF1-216ENST00000550208 CHURC1-FNTBB4DL54 471 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 LUC7L3O95232 432 aaKnown RBP23.26■■□□□ 1.31
BRF1-216ENST00000550208 CD70P32970 193 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 MRPS21P82921 87 aaKnown RBP23.26■■□□□ 1.31
BRF1-216ENST00000550208 FSCBQ5H9T9 825 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 MAMSTRQ6ZN01 415 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 MFN1Q8IWA4 741 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 MAML2Q8IZL2 1156 aaPredicted RBP23.26■■□□□ 1.31
BRF1-216ENST00000550208 CCDC33Q8N5R6 958 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 PRSS33Q8NF86 280 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 CCDC26Q8TAB7 109 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 LMLNQ96KR4 655 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 IER2Q9BTL4 223 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 ABCB8Q9NUT2 735 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 RAPGEFL1Q9UHV5 662 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 STARD13Q9Y3M8 1113 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 CACNA1IQ9P0X4 2223 aa23.26■■□□□ 1.31
BRF1-216ENST00000550208 DRGXA6NNA5 263 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 H0Y626 953 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 LAMTOR5O43504 91 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 SRGAP2O75044 1071 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 ATG13O75143 517 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 CNTN5O94779 1100 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 TMEM253P0C7T8 217 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 DESP17661 470 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 FECHP22830 423 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 CXCL12P48061 93 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 SATB1Q01826 763 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms