RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ARL13BQ3SXY8 428 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 LDB1Q86U70 411 aaPredicted RBP14.55□□□□□ -0.08
CACNB3-209ENST00000548860 ANKRD13AQ8IZ07 590 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 RNF139Q8WU17 664 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 GAD1Q99259 594 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 WDCPQ9H6R7 721 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 TNFSF13BQ9Y275 285 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 ASB14A6NK59 587 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 C2CD4BA6NLJ0 364 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 TYROBPO43914 113 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 ONECUT3O60422 494 aaPredicted RBP14.54□□□□□ -0.08
CACNB3-209ENST00000548860 STBD1O95210 358 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 TGFB3P10600 412 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 CSHL1Q14406 222 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 RPS27LQ71UM5 84 aaKnown RBP14.54□□□□□ -0.08
CACNB3-209ENST00000548860 ULK2Q8IYT8 1036 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 NUP93Q8N1F7 819 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 GPRC5AQ8NFJ5 357 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 GPR152Q8TDT2 470 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 TNIP3Q96KP6 325 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 CSPG4P5Q96PW8 444 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 CHRAC1Q9NRG0 131 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 VANGL2Q9ULK5 521 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 PLLPQ9Y342 182 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 C2CD2Q9Y426 696 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 CENPFP49454 3210 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 T-ENOLP0DO92 83 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 HNRNPLP14866 589 aaKnown RBP eCLIP14.54□□□□□ -0.08
CACNB3-209ENST00000548860 IL1RL1Q01638 556 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 POTEAQ6S8J7 498 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 TMPRSS6Q8IU80 811 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 SLCO2A1Q92959 643 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 PIDD1Q9HB75 910 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 DDX43Q9NXZ2 648 aaKnown RBP14.54□□□□□ -0.08
CACNB3-209ENST00000548860 ALADP13716 330 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 RAG1P15918 1043 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 NRF1Q16656 503 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 WLSQ5T9L3 541 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 RIOX2Q8IUF8 465 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 DDIASQ8IXT1 998 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 SPATA22Q8NHS9 363 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 CDRT15Q96T59 188 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 CCDC134Q9H6E4 229 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.54□□□□□ -0.08
CACNB3-209ENST00000548860 FAM8A1Q9UBU6 413 aa14.54□□□□□ -0.08
CACNB3-209ENST00000548860 NCF1BA6NI72 391 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 NCF1CA8MVU1 366 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 MAGEB2O15479 319 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 XPOTO43592 962 aaKnown RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 NCF1P14598 390 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 SPRP35270 261 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 TAF6P49848 677 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 TPD52P55327 224 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 MAXP61244 160 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 MPP3Q13368 585 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 LAMC2Q13753 1193 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 PDK1Q15118 436 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 TMEM198Q66K66 360 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 LRRC8EQ6NSJ5 796 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 ERO1BQ86YB8 467 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 PIWIL2Q8TC59 973 aaKnown RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 KCTD15Q96SI1 283 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 NIFKQ9BYG3 293 aaKnown RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 SLC5A4Q9NY91 659 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 SLC15A5A6NIM6 579 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 FAM200BP0CF97 657 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 ERCC2P18074 760 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 GRIK1P39086 918 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 ANO4Q32M45 955 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 SYPL2Q5VXT5 272 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 NOTUMQ6P988 496 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 ACAD11Q709F0 780 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 OTOP3Q7RTS5 596 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 ST13P4Q8IZP2 240 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 TDRD5Q8NAT2 981 aaKnown RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 INPP5DQ92835 1189 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 PAPOLBQ9NRJ5 636 aaKnown RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 TTC24A2A3L6 582 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 ITGA2BP08514 1039 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 HDAC4P56524 1084 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 RBBP5Q15291 538 aaKnown RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 EFHC1Q5JVL4 640 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 KRT80Q6KB66 452 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 B3GALT6Q96L58 329 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 OXCT2Q9BYC2 517 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 PFDN4Q9NQP4 134 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 DDX18Q9NVP1 670 aaKnown RBP14.53□□□□□ -0.08
CACNB3-209ENST00000548860 CEP350Q5VT06 3117 aa14.53□□□□□ -0.08
CACNB3-209ENST00000548860 C3orf70A6NLC5 250 aaPredicted RBP14.52□□□□□ -0.08
CACNB3-209ENST00000548860 B4GALT4O60513 344 aa14.52□□□□□ -0.08
CACNB3-209ENST00000548860 BDNFP23560 247 aa14.52□□□□□ -0.08
CACNB3-209ENST00000548860 OAZ1P54368 228 aa14.52□□□□□ -0.08
CACNB3-209ENST00000548860 BCAT1P54687 386 aa14.52□□□□□ -0.08
CACNB3-209ENST00000548860 MRPS35P82673 323 aaKnown RBP14.52□□□□□ -0.08
CACNB3-209ENST00000548860 IRF9Q00978 393 aa14.52□□□□□ -0.08
CACNB3-209ENST00000548860 BST2Q10589 180 aaKnown RBP14.52□□□□□ -0.08
CACNB3-209ENST00000548860 FLOT2Q14254 428 aa14.52□□□□□ -0.08
CACNB3-209ENST00000548860 TAF12Q16514 161 aa14.52□□□□□ -0.08
CACNB3-209ENST00000548860 HFE2Q6ZVN8 426 aa14.52□□□□□ -0.08
CACNB3-209ENST00000548860 SH3TC2Q8TF17 1288 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms