RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 ZSCAN9O15535 394 aaPredicted RBP23.73■■□□□ 1.39
NPAS3-206ENST00000548645 NUDT2P50583 147 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 MRPS22P82650 360 aaKnown RBP23.73■■□□□ 1.39
NPAS3-206ENST00000548645 DCTN2Q13561 401 aaKnown RBP23.73■■□□□ 1.39
NPAS3-206ENST00000548645 SEMA5AQ13591 1074 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 APOFQ13790 326 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 TICAM1Q8IUC6 712 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 TMEM176AQ96HP8 235 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 TWNKQ96RR1 684 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 RNPEPQ9H4A4 650 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 MAN1C1Q9NR34 630 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 RGS17Q9UGC6 210 aaPredicted RBP23.73■■□□□ 1.39
NPAS3-206ENST00000548645 RIMS3Q9UJD0 308 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 MMP10P09238 476 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 YY1P25490 414 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 TYK2P29597 1187 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 CCDC153Q494R4 210 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 TBCBQ99426 244 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 ZNF670Q9BS34 389 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 PADI4Q9UM07 663 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 HSPA4LO95757 839 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 ADARP55265 1226 aaKnown RBP23.73■■□□□ 1.39
NPAS3-206ENST00000548645 KYQ8NBH2 561 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 ZNF526Q8TF50 670 aaPredicted RBP23.73■■□□□ 1.39
NPAS3-206ENST00000548645 GFM2Q969S9 779 aaKnown RBP23.73■■□□□ 1.39
NPAS3-206ENST00000548645 ELOVL4Q9GZR5 314 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 NGRNQ9NPE2 291 aaKnown RBP23.73■■□□□ 1.39
NPAS3-206ENST00000548645 PACSIN3Q9UKS6 424 aa23.73■■□□□ 1.39
NPAS3-206ENST00000548645 TOMM70O94826 608 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 SLC9B1Q4ZJI4 515 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 STYK1Q6J9G0 422 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 BNC2Q6ZN30 1099 aaPredicted RBP23.72■■□□□ 1.39
NPAS3-206ENST00000548645 RPAP3Q9H6T3 665 aaPredicted RBP23.72■■□□□ 1.39
NPAS3-206ENST00000548645 TXNDC16Q9P2K2 825 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 H0YIN7 160 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 B4GALT4O60513 344 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 MLNP12872 115 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 SERPINB8P50452 374 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 CREB5Q02930 508 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 STILQ15468 1287 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 PPM1JQ5JR12 505 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 ZNF410Q86VK4 478 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 UBA3Q8TBC4 463 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 GAB3Q8WWW8 586 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 ATG4CQ96DT6 458 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 CLMNQ96JQ2 1002 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 HMGXB4Q9UGU5 601 aa23.72■■□□□ 1.39
NPAS3-206ENST00000548645 GRAP2O75791 330 aa23.71■■□□□ 1.39
NPAS3-206ENST00000548645 FAM183BPQ6ZVS7 135 aa23.71■■□□□ 1.39
NPAS3-206ENST00000548645 ZNF781Q8N8C0 355 aa23.71■■□□□ 1.39
NPAS3-206ENST00000548645 VPS33BQ9H267 617 aa23.71■■□□□ 1.39
NPAS3-206ENST00000548645 COPS7BQ9H9Q2 264 aaPredicted RBP23.71■■□□□ 1.39
NPAS3-206ENST00000548645 TCF7L2Q9NQB0 619 aa23.71■■□□□ 1.39
NPAS3-206ENST00000548645 VPS28Q9UK41 221 aa23.71■■□□□ 1.39
NPAS3-206ENST00000548645 RGSL1A5PLK6 1076 aa23.71■■□□□ 1.39
NPAS3-206ENST00000548645 TRMUO75648 421 aaKnown RBP23.71■■□□□ 1.39
NPAS3-206ENST00000548645 GLDCP23378 1020 aa23.71■■□□□ 1.39
NPAS3-206ENST00000548645 SERPINB5P36952 375 aa23.71■■□□□ 1.39
NPAS3-206ENST00000548645 GARSP41250 739 aaKnown RBP23.71■■□□□ 1.39
NPAS3-206ENST00000548645 NUMBP49757 651 aa23.71■■□□□ 1.39
NPAS3-206ENST00000548645 CCDC14Q49A88 953 aa23.71■■□□□ 1.39
NPAS3-206ENST00000548645 ACBD5Q5T8D3 534 aaPredicted RBP23.71■■□□□ 1.39
NPAS3-206ENST00000548645 PRPF31Q8WWY3 499 aaKnown RBP23.71■■□□□ 1.39
NPAS3-206ENST00000548645 PPP1R14BQ96C90 147 aa23.71■■□□□ 1.39
NPAS3-206ENST00000548645 CDRT15Q96T59 188 aa23.71■■□□□ 1.39
NPAS3-206ENST00000548645 SNRNP25Q9BV90 132 aaKnown RBP23.71■■□□□ 1.39
NPAS3-206ENST00000548645 PIK3R2O00459 728 aa23.7■■□□□ 1.39
NPAS3-206ENST00000548645 CILPO75339 1184 aa23.7■■□□□ 1.39
NPAS3-206ENST00000548645 VDRP11473 427 aa23.7■■□□□ 1.39
NPAS3-206ENST00000548645 CA9Q16790 459 aa23.7■■□□□ 1.39
NPAS3-206ENST00000548645 PPP6R3Q5H9R7 873 aaPredicted RBP23.7■■□□□ 1.39
NPAS3-206ENST00000548645 DSELQ8IZU8 1212 aa23.7■■□□□ 1.39
NPAS3-206ENST00000548645 SREK1Q8WXA9 508 aaKnown RBP23.7■■□□□ 1.39
NPAS3-206ENST00000548645 DLG3Q92796 817 aa23.7■■□□□ 1.39
NPAS3-206ENST00000548645 FERMT1Q9BQL6 677 aa23.7■■□□□ 1.39
NPAS3-206ENST00000548645 MORF4L1Q9UBU8 362 aa23.7■■□□□ 1.39
NPAS3-206ENST00000548645 PRKCBP05771 671 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 PIK3R1P27986 724 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 SLC5A2P31639 672 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 THOP1P52888 689 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 SP2Q02086 613 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 SULT2A1Q06520 285 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 GK3PQ14409 553 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 C6orf52Q5T4I8 152 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 DPH6Q7L8W6 267 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 HEXIM2Q96MH2 286 aaKnown RBP23.7■■□□□ 1.38
NPAS3-206ENST00000548645 NRBP2Q9NSY0 501 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 PSAT1Q9Y617 370 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 AK5Q9Y6K8 562 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 GPR25O00155 361 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 ADCY6O43306 1168 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 PGAM1P18669 254 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 CYP2F1P24903 491 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 ZNF423Q2M1K9 1284 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 SNX32Q86XE0 403 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 CEP70Q8NHQ1 597 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 DIS3LQ8TF46 1054 aaKnown RBP23.7■■□□□ 1.38
NPAS3-206ENST00000548645 KBTBD7Q8WVZ9 684 aa23.7■■□□□ 1.38
NPAS3-206ENST00000548645 PIWIL1Q96J94 861 aaKnown RBP23.7■■□□□ 1.38
NPAS3-206ENST00000548645 TMEM114B3SHH9 223 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms