RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 OLR1P78380 273 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 MAPK11Q15759 364 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 SUPT20HL1Q3ZLR7 823 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 TIGD7Q6NT04 549 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-212ENST00000546744 POU5F2Q8N7G0 328 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 DDX50Q9BQ39 737 aaKnown RBP13.09□□□□□ -0.31
PTCH1-212ENST00000546744 CCDC154A6NI56 674 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 SSTR1P30872 391 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 STAT5AP42229 794 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 STAT5BP51692 787 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 BST1Q10588 318 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 TKFCQ3LXA3 575 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 PIWIL4Q7Z3Z4 852 aaKnown RBP13.09□□□□□ -0.31
PTCH1-212ENST00000546744 FAM120BQ96EK7 910 aaKnown RBP13.09□□□□□ -0.31
PTCH1-212ENST00000546744 VAT1Q99536 393 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 MXRA8Q9BRK3 442 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 SARS2Q9NP81 518 aaKnown RBP13.09□□□□□ -0.31
PTCH1-212ENST00000546744 RPRD1BQ9NQG5 326 aaKnown RBP13.09□□□□□ -0.31
PTCH1-212ENST00000546744 TK2O00142 265 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 STX11O75558 287 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 ASMTLO95671 621 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 CYP1A2P05177 515 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 SREBF1P36956 1147 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 RAB27AP51159 221 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 GALK1P51570 392 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 ENPEPQ07075 957 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 NME3Q13232 169 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 MIIPQ5JXC2 388 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 MFSD4BQ5TF39 518 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 DENND5AQ6IQ26 1287 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 CYP4Z1Q86W10 505 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 ZDHHC17Q8IUH5 632 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 FITM2Q8N6M3 262 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 LPAR1Q92633 364 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 DENND2DQ9H6A0 471 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-212ENST00000546744 JMJD4Q9H9V9 463 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 RNF146Q9NTX7 359 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 MAPRE3Q9UPY8 281 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 EFR3BQ9Y2G0 817 aa13.09□□□□□ -0.31
PTCH1-212ENST00000546744 GRIN2DO15399 1336 aa13.08□□□□□ -0.31
PTCH1-212ENST00000546744 BCL9LQ86UU0 1499 aa13.08□□□□□ -0.31
PTCH1-212ENST00000546744 ATG7O95352 703 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 NUP62P37198 522 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 INO80DQ53TQ3 878 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 BTBD8Q5XKL5 378 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 SNRNP48Q6IEG0 339 aaKnown RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 TTC7BQ86TV6 843 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 ECHDC2Q86YB7 292 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 WRNIP1Q96S55 665 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 RNPEPQ9H4A4 650 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 PRMT7Q9NVM4 692 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 TRHDEQ9UKU6 1024 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 KRT87PA6NCN2 255 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 PSMD12O00232 456 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 PENKP01210 267 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 RECQLP46063 649 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 CASP5P51878 434 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 PSMC6P62333 389 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 TSC22D1Q15714 1073 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 LRRC55Q6ZSA7 311 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 LDHDQ86WU2 507 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 SUN5Q8TC36 379 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 DQX1Q8TE96 717 aaKnown RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 USP13Q92995 863 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 NMRAL1Q9HBL8 299 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 USP18Q9UMW8 372 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 FNDC3AQ9Y2H6 1198 aaKnown RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 A0A096LPK6 155 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 BBIP1A8MTZ0 92 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 LSM1O15116 133 aaKnown RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 CYP1A1P04798 512 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 PCSK2P16519 638 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 CASP4P49662 377 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 TMEM132DQ14C87 1099 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 INSCQ1MX18 579 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 SMTNL2Q2TAL5 461 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 ANKS3Q6ZW76 656 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 CHSY1Q86X52 802 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 ERI1Q8IV48 349 aaKnown RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 ZBTB8BQ8NAP8 495 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 HM13Q8TCT9 377 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 CGRRF1Q99675 332 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 KRCC1Q9NPI7 259 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 ING3Q9NXR8 418 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 ING4Q9UNL4 249 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 MTF2Q9Y483 593 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-212ENST00000546744 LRRC42Q9Y546 428 aa13.08□□□□□ -0.32
PTCH1-212ENST00000546744 COL16A1Q07092 1604 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-212ENST00000546744 CLDN25C9JDP6 229 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 PNPLA4P41247 253 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 BAG6P46379 1132 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 PSME3P61289 254 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 BICRALQ6AI39 1079 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 STARD8Q92502 1023 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 KIF12Q96FN5 646 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 RGS18Q9NS28 235 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.07□□□□□ -0.32
PTCH1-212ENST00000546744 VAV3Q9UKW4 847 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 GSTK1Q9Y2Q3 226 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms