RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 ACBD5Q5T8D3 534 aaPredicted RBP20.06■□□□□ 0.8
SKP2-208ENST00000546211 NUGGCQ68CJ6 796 aa20.06■□□□□ 0.8
SKP2-208ENST00000546211 ZDHHC24Q6UX98 284 aa20.06■□□□□ 0.8
SKP2-208ENST00000546211 SPRED2Q7Z698 418 aa20.06■□□□□ 0.8
SKP2-208ENST00000546211 FAM71DQ8N9W8 422 aa20.06■□□□□ 0.8
SKP2-208ENST00000546211 GLIS1Q8NBF1 620 aa20.06■□□□□ 0.8
SKP2-208ENST00000546211 FBXO25Q8TCJ0 367 aa20.06■□□□□ 0.8
SKP2-208ENST00000546211 GRM6O15303 877 aa20.05■□□□□ 0.8
SKP2-208ENST00000546211 FGF10O15520 208 aaPredicted RBP20.05■□□□□ 0.8
SKP2-208ENST00000546211 KCNN4O15554 427 aa20.05■□□□□ 0.8
SKP2-208ENST00000546211 RBL1P28749 1068 aa20.05■□□□□ 0.8
SKP2-208ENST00000546211 MLLT6P55198 1093 aaPredicted RBP20.05■□□□□ 0.8
SKP2-208ENST00000546211 PDK1Q15118 436 aa20.05■□□□□ 0.8
SKP2-208ENST00000546211 COL13A1Q5TAT6 717 aaPredicted RBP20.05■□□□□ 0.8
SKP2-208ENST00000546211 IZUMO3Q5VZ72 239 aa20.05■□□□□ 0.8
SKP2-208ENST00000546211 TFB1MQ8WVM0 346 aaKnown RBP20.05■□□□□ 0.8
SKP2-208ENST00000546211 OLFM3Q96PB7 478 aa20.05■□□□□ 0.8
SKP2-208ENST00000546211 QKIQ96PU8 341 aaKnown RBP eCLIP20.05■□□□□ 0.81e-8■■■□□ 18.8
SKP2-208ENST00000546211 CATSPERBQ9H7T0 1116 aa20.05■□□□□ 0.8
SKP2-208ENST00000546211 XPO7Q9UIA9 1087 aaKnown RBP20.05■□□□□ 0.8
SKP2-208ENST00000546211 ANAPC5Q9UJX4 755 aa20.05■□□□□ 0.8
SKP2-208ENST00000546211 E9PAM4 449 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 PPP1R12AO14974 1030 aaPredicted RBP20.04■□□□□ 0.8
SKP2-208ENST00000546211 COCHO43405 550 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 HOXC13P31276 330 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 CLCN4P51793 760 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 ITGA8P53708 1063 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 COG7P83436 770 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 PIK3R6Q5UE93 754 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 MANEALQ5VSG8 457 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 PDE12Q6L8Q7 609 aaKnown RBP20.04■□□□□ 0.8
SKP2-208ENST00000546211 LRRC31Q6UY01 552 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 B4GALNT4Q76KP1 1039 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 FERMT1Q9BQL6 677 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 USP29Q9HBJ7 922 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 ZNF334Q9HCZ1 680 aaPredicted RBP20.04■□□□□ 0.8
SKP2-208ENST00000546211 DNALI1O14645 258 aaPredicted RBP20.04■□□□□ 0.8
SKP2-208ENST00000546211 NCAM2O15394 837 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 ZNF189O75820 626 aaPredicted RBP20.04■□□□□ 0.8
SKP2-208ENST00000546211 ERVK-21P61565 698 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 GPM6BQ13491 265 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 MS4A13Q5J8X5 152 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 PPM1LQ5SGD2 360 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 HEATR6Q6AI08 1181 aaKnown RBP20.04■□□□□ 0.8
SKP2-208ENST00000546211 RTP4Q96DX8 246 aa20.04■□□□□ 0.8
SKP2-208ENST00000546211 TPX2Q9ULW0 747 aaKnown RBP20.04■□□□□ 0.8
SKP2-208ENST00000546211 C1RP00736 705 aa20.03■□□□□ 0.8
SKP2-208ENST00000546211 OAS1P00973 400 aaKnown RBP20.03■□□□□ 0.8
SKP2-208ENST00000546211 F11P03951 625 aa20.03■□□□□ 0.8
SKP2-208ENST00000546211 RPL22P35268 128 aaKnown RBP20.03■□□□□ 0.8
SKP2-208ENST00000546211 IRS1P35568 1242 aa20.03■□□□□ 0.8
SKP2-208ENST00000546211 RTL10Q7L3V2 364 aa20.03■□□□□ 0.8
SKP2-208ENST00000546211 PCGF5Q86SE9 256 aa20.03■□□□□ 0.8
SKP2-208ENST00000546211 MREGQ8N565 214 aa20.03■□□□□ 0.8
SKP2-208ENST00000546211 CCDC33Q8N5R6 958 aa20.03■□□□□ 0.8
SKP2-208ENST00000546211 PLD4Q96BZ4 506 aa20.03■□□□□ 0.8
SKP2-208ENST00000546211 NEU3Q9UQ49 428 aa20.03■□□□□ 0.8
SKP2-208ENST00000546211 CLUHO75153 1309 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 C2orf78A6NCI8 922 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 H3BNC9 293 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 MAP2K7O14733 419 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 MX2P20592 715 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 HSPA9P38646 679 aaKnown RBP20.02■□□□□ 0.8
SKP2-208ENST00000546211 HARS2P49590 506 aaKnown RBP20.02■□□□□ 0.8
SKP2-208ENST00000546211 AUHQ13825 339 aaKnown RBP20.02■□□□□ 0.8
SKP2-208ENST00000546211 CAMK1Q14012 370 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 C4orf22Q6V702 233 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 C14orf80Q86SX3 495 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 TMEM150AQ86TG1 271 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 LZTR1Q8N653 840 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 CCNYQ8ND76 341 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 BRD8Q9H0E9 1235 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 TSPYL1Q9H0U9 437 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 ACBD3Q9H3P7 528 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 VIPAS39Q9H9C1 493 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 IL21Q9HBE4 155 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 PAK5Q9P286 719 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 VANGL2Q9ULK5 521 aa20.02■□□□□ 0.8
SKP2-208ENST00000546211 YBX2Q9Y2T7 364 aaKnown RBP20.02■□□□□ 0.8
SKP2-208ENST00000546211 SASH3O75995 380 aa20.01■□□□□ 0.79
SKP2-208ENST00000546211 GABRR2P28476 465 aa20.01■□□□□ 0.79
SKP2-208ENST00000546211 KCNQ1P51787 676 aa20.01■□□□□ 0.79
SKP2-208ENST00000546211 AP1B1Q10567 949 aa20.01■□□□□ 0.79
SKP2-208ENST00000546211 RAP1GAP2Q684P5 730 aa20.01■□□□□ 0.79
SKP2-208ENST00000546211 HIBCHQ6NVY1 386 aaPredicted RBP20.01■□□□□ 0.79
SKP2-208ENST00000546211 RHBDF2Q6PJF5 856 aa20.01■□□□□ 0.79
SKP2-208ENST00000546211 NPWQ8N729 165 aa20.01■□□□□ 0.79
SKP2-208ENST00000546211 HTR3CQ8WXA8 447 aa20.01■□□□□ 0.79
SKP2-208ENST00000546211 MRPS31Q92665 395 aaKnown RBP20.01■□□□□ 0.79
SKP2-208ENST00000546211 GCNAQ96QF7 691 aa20.01■□□□□ 0.79
SKP2-208ENST00000546211 LGMNQ99538 433 aa20.01■□□□□ 0.79
SKP2-208ENST00000546211 PRDM12Q9H4Q4 367 aa20.01■□□□□ 0.79
SKP2-208ENST00000546211 TRPC7Q9HCX4 862 aa20.01■□□□□ 0.79
SKP2-208ENST00000546211 PPARGC1AQ9UBK2 798 aaKnown RBP20.01■□□□□ 0.79
SKP2-208ENST00000546211 HSFX4A0A1B0GTS1 333 aaPredicted RBP20■□□□□ 0.79
SKP2-208ENST00000546211 HSFX3A0A1B0GWH4 333 aaPredicted RBP20■□□□□ 0.79
SKP2-208ENST00000546211 STK10O94804 968 aaKnown RBP20■□□□□ 0.79
SKP2-208ENST00000546211 MBL2P11226 248 aaPredicted RBP20■□□□□ 0.79
SKP2-208ENST00000546211 CDC25CP30307 473 aa20■□□□□ 0.79
SKP2-208ENST00000546211 SLC11A2P49281 568 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms