RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ZNF394Q53GI3 561 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 PRRT3Q5FWE3 981 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 ISM2Q6H9L7 571 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 C1orf229Q6ZS94 237 aaPredicted RBP8.07□□□□□ -1.12
SNHG1-223ENST00000545440 TADA2BQ86TJ2 420 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 TRIM59Q8IWR1 403 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 SULF2Q8IWU5 870 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 ZNF276Q8N554 614 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 UBR7Q8N806 425 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 CCDC26Q8TAB7 109 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 RUBCNQ92622 972 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 JAKMIP2Q96AA8 810 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 HEXIM2Q96MH2 286 aaKnown RBP8.07□□□□□ -1.12
SNHG1-223ENST00000545440 TMEM74Q96NL1 305 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 NT5C1BQ96P26 610 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 CDK5RAP1Q96SZ6 601 aaKnown RBP8.07□□□□□ -1.12
SNHG1-223ENST00000545440 CHORDC1Q9UHD1 332 aaPredicted RBP8.07□□□□□ -1.12
SNHG1-223ENST00000545440 SMG5Q9UPR3 1016 aaKnown RBP8.07□□□□□ -1.12
SNHG1-223ENST00000545440 SH3BP1Q9Y3L3 701 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 CCDC163A0A0D9SF12 145 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-223ENST00000545440 GNB5O14775 395 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 FGFR1OPO95684 399 aaKnown RBP8.06□□□□□ -1.12
SNHG1-223ENST00000545440 CCDC192P0DO97 292 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 ADH5P11766 374 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 ARNTP27540 789 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 CNR2P34972 360 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 ATP5C1P36542 298 aaKnown RBP8.06□□□□□ -1.12
SNHG1-223ENST00000545440 OPRD1P41143 372 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 PGFP49763 221 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 GALK1P51570 392 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 BCAT1P54687 386 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 GCNT1Q02742 428 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 SUZ12Q15022 739 aaKnown RBP8.06□□□□□ -1.12
SNHG1-223ENST00000545440 DHCR24Q15392 516 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 SGO2Q562F6 1265 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 RAB41Q5JT25 222 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 SNAP47Q5SQN1 464 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 NAIF1Q69YI7 327 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-223ENST00000545440 PKN3Q6P5Z2 889 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 PIGZQ86VD9 579 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 LONP2Q86WA8 852 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 ADGRG2Q8IZP9 1017 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 ARHGAP18Q8N392 663 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 ANKRD52Q8NB46 1076 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 EZH1Q92800 747 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-223ENST00000545440 SECISBP2LQ93073 1101 aaKnown RBP8.06□□□□□ -1.12
SNHG1-223ENST00000545440 UBXN6Q9BZV1 441 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 MIR1-1HGQ9H1L0 117 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 LINC00597Q9H2U6 94 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 CAPN10Q9HC96 672 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 FBRSL1Q9HCM7 1045 aaKnown RBP8.06□□□□□ -1.12
SNHG1-223ENST00000545440 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.06□□□□□ -1.12
SNHG1-223ENST00000545440 C2orf42Q9NWW7 574 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 OSER1Q9NX31 292 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 CLIC5Q9NZA1 410 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 RWDD2AQ9UIY3 292 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 TSPAN16Q9UKR8 245 aa8.06□□□□□ -1.12
SNHG1-223ENST00000545440 DCHS1Q96JQ0 3298 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 DOCK4Q8N1I0 1966 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 A0A1W2PQH9 124 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 O00370 1275 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 ENC1O14682 589 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 XPO1O14980 1071 aaKnown RBP8.05□□□□□ -1.12
SNHG1-223ENST00000545440 HOXC11O43248 304 aaPredicted RBP8.05□□□□□ -1.12
SNHG1-223ENST00000545440 AFPP02771 609 aaKnown RBP8.05□□□□□ -1.12
SNHG1-223ENST00000545440 CELA3AP09093 270 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 PAEPP09466 180 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 SETSIPP0DME0 302 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 RALAP11233 206 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 VDRP11473 427 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 FNTBP49356 437 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 STX17P56962 302 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 INSM1Q01101 510 aaPredicted RBP8.05□□□□□ -1.12
SNHG1-223ENST00000545440 BST2Q10589 180 aaKnown RBP8.05□□□□□ -1.12
SNHG1-223ENST00000545440 LRMPQ12912 555 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 ZNF423Q2M1K9 1284 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 GOLGA7BQ2TAP0 167 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 RHBDF2Q6PJF5 856 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 CLEC17AQ6ZS10 378 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 HTR3DQ70Z44 454 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 SYT13Q7L8C5 426 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 ERMP1Q7Z2K6 904 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 WDR5BQ86VZ2 330 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 TTC30AQ86WT1 665 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 BBS7Q8IWZ6 715 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 PPM1KQ8N3J5 372 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 CAMKK1Q8N5S9 505 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 BEND7Q8N7W2 519 aaPredicted RBP8.05□□□□□ -1.12
SNHG1-223ENST00000545440 RPLP0P6Q8NHW5 317 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 LMO3Q8TAP4 145 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 SPON2Q9BUD6 331 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 CLSTN2Q9H4D0 955 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 NMUR1Q9HB89 426 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 NCDNQ9UBB6 729 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 HESX1Q9UBX0 185 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 LSM7Q9UK45 103 aaKnown RBP8.05□□□□□ -1.12
SNHG1-223ENST00000545440 GMEB2Q9UKD1 530 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 RAB23Q9ULC3 237 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 KIAA1257Q9ULG3 409 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms