RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 UBE2OQ9C0C9 1292 aaKnown RBP20.44■□□□□ 0.86
COPS7A-218ENST00000543939 A0A0A0MRY4 1105 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 E7ESA3 106 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 EIF3HO15372 352 aaKnown RBP eCLIP20.43■□□□□ 0.86
COPS7A-218ENST00000543939 NCAM2O15394 837 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 TBX18O95935 607 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 EN2P19622 333 aaPredicted RBP20.43■□□□□ 0.86
COPS7A-218ENST00000543939 PPM1AP35813 382 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 FASTKD3Q14CZ7 662 aaKnown RBP20.43■□□□□ 0.86
COPS7A-218ENST00000543939 TRIP4Q15650 581 aaPredicted RBP20.43■□□□□ 0.86
COPS7A-218ENST00000543939 FNBP1LQ5T0N5 605 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 CROCCP2Q86T23 111 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 SH2D3CQ8N5H7 860 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 P2RY11Q96G91 374 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 SPATA13Q96N96 652 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 TTC25Q96NG3 672 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 KLC2Q9H0B6 622 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 ETNK1Q9HBU6 452 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 NR2E3Q9Y5X4 410 aa20.43■□□□□ 0.86
COPS7A-218ENST00000543939 ZNF189O75820 626 aaPredicted RBP20.42■□□□□ 0.86
COPS7A-218ENST00000543939 FGBP02675 491 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 URODP06132 367 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 ABHD2P08910 425 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 SRGAP2BP0DMP2 458 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 SERPINB6P35237 376 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 HTRA4P83105 476 aaPredicted RBP20.42■□□□□ 0.86
COPS7A-218ENST00000543939 AP1B1Q10567 949 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 PDIA2Q13087 525 aaKnown RBP20.42■□□□□ 0.86
COPS7A-218ENST00000543939 CBLBQ13191 982 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 RAB33AQ14088 237 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 VPS52Q8N1B4 723 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 C1orf74Q96LT6 269 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 ROPN1BQ9BZX4 212 aaPredicted RBP20.42■□□□□ 0.86
COPS7A-218ENST00000543939 BRD8Q9H0E9 1235 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 CENPHQ9H3R5 247 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 ROPN1Q9HAT0 212 aaPredicted RBP20.42■□□□□ 0.86
COPS7A-218ENST00000543939 MARCH2Q9P0N8 246 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 MAGED2Q9UNF1 606 aaPredicted RBP20.42■□□□□ 0.86
COPS7A-218ENST00000543939 HS3ST4Q9Y661 456 aa20.42■□□□□ 0.86
COPS7A-218ENST00000543939 MYO18AQ92614 2054 aaKnown RBP20.42■□□□□ 0.86
COPS7A-218ENST00000543939 ZBBXA8MT70 800 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 GJB5O95377 273 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 METTL18O95568 372 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 MOCS2O96007 188 aaPredicted RBP20.41■□□□□ 0.86
COPS7A-218ENST00000543939 MLLT6P55198 1093 aaPredicted RBP20.41■□□□□ 0.86
COPS7A-218ENST00000543939 PPIDQ08752 370 aaKnown RBP20.41■□□□□ 0.86
COPS7A-218ENST00000543939 GALNT2Q10471 571 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 MSS51Q4VC12 460 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 ANKRD20A2Q5SQ80 823 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 C10orf120Q5SQS8 335 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 ANKRD20A1Q5TYW2 823 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 ANKRD20A3Q5VUR7 823 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 GPR65Q8IYL9 337 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 ZNF276Q8N554 614 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 CCNYQ8ND76 341 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 BADQ92934 168 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 TBC1D31Q96DN5 1066 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 FERMT1Q9BQL6 677 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 DOCK4Q8N1I0 1966 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 SHROOM3Q8TF72 1996 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 RNF103O00237 685 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 FGF10O15520 208 aaPredicted RBP20.41■□□□□ 0.86
COPS7A-218ENST00000543939 IGLV3-27P01718 113 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 LINC00271P0C7V0 271 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 MX2P20592 715 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 FPGSQ05932 587 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 WASHC5Q12768 1159 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 TERF2Q15554 542 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 FAXCQ5TGI0 409 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 PIK3R6Q5UE93 754 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 RWDD4Q6NW29 188 aaKnown RBP20.41■□□□□ 0.86
COPS7A-218ENST00000543939 PPP1R21Q6ZMI0 780 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 ARHGEF18Q6ZSZ5 1173 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 CCDC13Q8IYE1 715 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 ZBED8Q8IZ13 594 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 PDIK1LQ8N165 341 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 EPS8L3Q8TE67 593 aaKnown RBP20.41■□□□□ 0.86
COPS7A-218ENST00000543939 OVCA2Q8WZ82 227 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 HDAC11Q96DB2 347 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 PGM2Q96G03 612 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 PRKAG2Q9UGJ0 569 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 ZMYND8Q9ULU4 1186 aaPredicted RBP20.41■□□□□ 0.86
COPS7A-218ENST00000543939 PCDHB12Q9Y5F1 795 aa20.41■□□□□ 0.86
COPS7A-218ENST00000543939 RASGRF2O14827 1237 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 OPHN1O60890 802 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 BANF1O75531 89 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 TCEA3O75764 348 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 STK10O94804 968 aaKnown RBP20.4■□□□□ 0.86
COPS7A-218ENST00000543939 APOEP02649 317 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 HMGA1P17096 107 aaKnown RBP20.4■□□□□ 0.86
COPS7A-218ENST00000543939 HP1BP3Q5SSJ5 553 aaPredicted RBP20.4■□□□□ 0.86
COPS7A-218ENST00000543939 C6orf118Q5T5N4 469 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 SNX30Q5VWJ9 437 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 C14orf80Q86SX3 495 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 PDZD8Q8NEN9 1154 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 AUTS2Q8WXX7 1259 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 EXOC4Q96A65 974 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 FRMD8Q9BZ67 464 aaPredicted RBP20.4■□□□□ 0.86
COPS7A-218ENST00000543939 MCOLN1Q9GZU1 580 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 CATSPERBQ9H7T0 1116 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms