RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 HAPLN3Q96S86 360 aa14.11□□□□□ -0.15
VPS33A-208ENST00000543633 PDZD7Q9H5P4 517 aa14.11□□□□□ -0.15
VPS33A-208ENST00000543633 AP4E1Q9UPM8 1137 aa14.11□□□□□ -0.15
VPS33A-208ENST00000543633 PCDHB12Q9Y5F1 795 aa14.11□□□□□ -0.15
VPS33A-208ENST00000543633 SMIM31A0A1B0GVY4 71 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 PDLIM1O00151 329 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 ZNF195O14628 629 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 SLC22A2O15244 555 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 RNASEH1O60930 286 aaKnown RBP14.1□□□□□ -0.15
VPS33A-208ENST00000543633 USP1O94782 785 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 PABPC4LP0CB38 370 aaKnown RBP14.1□□□□□ -0.15
VPS33A-208ENST00000543633 GSTT1P30711 240 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 GP5P40197 560 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 NUMBP49757 651 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 SLC10A2Q12908 348 aaPredicted RBP14.1□□□□□ -0.15
VPS33A-208ENST00000543633 AMHR2Q16671 573 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 LY6KQ17RY6 165 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 SLC10A6Q3KNW5 377 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 PPP6R3Q5H9R7 873 aaPredicted RBP14.1□□□□□ -0.15
VPS33A-208ENST00000543633 SPANXN3Q5MJ09 141 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 GRTP1Q5TC63 336 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 ARHGAP17Q68EM7 881 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 EFCAB12Q6NXP0 572 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 MAVSQ7Z434 540 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 SLC35F5Q8WV83 523 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 SREK1Q8WXA9 508 aaKnown RBP14.1□□□□□ -0.15
VPS33A-208ENST00000543633 CSPG4P5Q96PW8 444 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 CPNE1Q99829 537 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 LBHD1Q9BQE6 289 aaPredicted RBP14.1□□□□□ -0.15
VPS33A-208ENST00000543633 RTKNQ9BST9 563 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 EBF3Q9H4W6 596 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 MINDY3Q9H8M7 445 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 DTLQ9NZJ0 730 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 BTBD7Q9P203 1132 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 MID2Q9UJV3 735 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 PRPF19Q9UMS4 504 aaKnown RBP14.1□□□□□ -0.15
VPS33A-208ENST00000543633 ARHGAP26Q9UNA1 814 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 FZD1Q9UP38 647 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 DERAQ9Y315 318 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 WDR27A2RRH5 827 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 PAPSS1O43252 624 aaPredicted RBP14.1□□□□□ -0.15
VPS33A-208ENST00000543633 LYPLA1O75608 230 aaPredicted RBP14.1□□□□□ -0.15
VPS33A-208ENST00000543633 GRAP2O75791 330 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 PRKCGP05129 697 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 RALBP11234 206 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 ITGAXP20702 1163 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 CNPY1Q3B7I2 92 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 ZNF484Q5JVG2 852 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 NCBP2-AS2Q69YL0 99 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 PMF1Q6P1K2 205 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 STRADAQ7RTN6 431 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 TTC30AQ86WT1 665 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 FBXW8Q8N3Y1 598 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 GORASP1Q9BQQ3 440 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 DHX35Q9H5Z1 703 aaKnown RBP14.1□□□□□ -0.15
VPS33A-208ENST00000543633 MTMR10Q9NXD2 777 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 DPP3Q9NY33 737 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 C6orf203Q9P0P8 240 aaPredicted RBP14.1□□□□□ -0.15
VPS33A-208ENST00000543633 POMPQ9Y244 141 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 USP3Q9Y6I4 520 aa14.1□□□□□ -0.15
VPS33A-208ENST00000543633 GLTPD2A6NH11 291 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 C22orf31O95567 290 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 RPL34P49207 117 aaKnown RBP14.09□□□□□ -0.15
VPS33A-208ENST00000543633 RGS7P49802 495 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 SERPINB8P50452 374 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 CLCN3P51790 818 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 MTTPP55157 894 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 MSLNQ13421 630 aaPredicted RBP14.09□□□□□ -0.15
VPS33A-208ENST00000543633 ANKRD20A4Q4UJ75 823 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 RASIP1Q5U651 963 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 C16orf46Q6P387 395 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 DLK2Q6UY11 383 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 UNC93AQ86WB7 457 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 TRIM50Q86XT4 487 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 C10orf107Q8IVU9 208 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 SLC25A41Q8N5S1 370 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 SLC26A7Q8TE54 656 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 GDPD5Q8WTR4 605 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 ARNTL2Q8WYA1 636 aa14.09□□□□□ -0.15
VPS33A-208ENST00000543633 KPNA7A9QM74 516 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 ZCCHC18P0CG32 403 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 VAV1P15498 845 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 ARL4AP40617 200 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 GLUD2P49448 558 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 ITGA9Q13797 1035 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 PRKG1Q13976 671 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 HSDL1Q3SXM5 330 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 PPP1R26Q5T8A7 1209 aaPredicted RBP14.08□□□□□ -0.15
VPS33A-208ENST00000543633 OGFRL1Q5TC84 451 aaPredicted RBP14.08□□□□□ -0.15
VPS33A-208ENST00000543633 DENND5BQ6ZUT9 1274 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 KBTBD6Q86V97 674 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 CDR2LQ86X02 465 aaPredicted RBP14.08□□□□□ -0.15
VPS33A-208ENST00000543633 LINC01465Q8N7H1 131 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 CATSPER1Q8NEC5 780 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 PYDC1Q8WXC3 89 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 KCTD15Q96SI1 283 aaPredicted RBP14.08□□□□□ -0.15
VPS33A-208ENST00000543633 TRIM56Q9BRZ2 755 aaKnown RBP14.08□□□□□ -0.15
VPS33A-208ENST00000543633 CDH19Q9H159 772 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 IGSF9Q9P2J2 1179 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 TXNDC16Q9P2K2 825 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms