RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 SIK3Q9Y2K2 1263 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 LRPAP1P30533 357 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 ZDHHC17Q8IUH5 632 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 THAP2Q9H0W7 228 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 ZMYM2Q9UBW7 1377 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 KCNH1O95259 989 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 ZNF609O15014 1411 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 MYMKA6NI61 221 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 KCNJ1P48048 391 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 BNIP2Q12982 314 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 OTUD3Q5T2D3 398 aaPredicted RBP19.78■□□□□ 0.76
HDAC4-215ENST00000543185 MUC13Q9H3R2 512 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 ZNF112Q9UJU3 913 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 UNC5CO95185 931 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 COX4I2Q96KJ9 171 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 TEX46H3BTG2 121 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 SNAPC5O75971 98 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 LBPP18428 481 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 AVPR1AP37288 418 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 RPL3P39023 403 aaKnown RBP19.78■□□□□ 0.76
HDAC4-215ENST00000543185 GRIK3Q13003 919 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 EIF3MQ7L2H7 374 aaKnown RBP19.78■□□□□ 0.76
HDAC4-215ENST00000543185 TRIM48Q8IWZ4 208 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 OR52L1Q8NGH7 329 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 DPF2Q92785 391 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 SLC38A2Q96QD8 506 aa19.78■□□□□ 0.76
HDAC4-215ENST00000543185 ETS1P14921 441 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 ITGALP20701 1170 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 CASP5P51878 434 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 SMCO1Q147U7 214 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 PRR5LQ6MZQ0 368 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 PRR23BQ6ZRT6 265 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 MOV10Q9HCE1 1003 aaKnown RBP19.77■□□□□ 0.76
HDAC4-215ENST00000543185 ADRA2BP18089 450 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 TNK2Q07912 1038 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 DALRD3Q5D0E6 543 aaKnown RBP19.77■□□□□ 0.76
HDAC4-215ENST00000543185 SWT1Q5T5J6 900 aaKnown RBP19.77■□□□□ 0.76
HDAC4-215ENST00000543185 CXXC5Q7LFL8 322 aaKnown RBP19.77■□□□□ 0.76
HDAC4-215ENST00000543185 BGNP21810 368 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 SLC11A2P49281 568 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 RNF43Q68DV7 783 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.77■□□□□ 0.762e-6■■■■■ 171.9
HDAC4-215ENST00000543185 GPRASP2Q96D09 838 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 FNDC5Q8NAU1 212 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 OR56A4Q8NGH8 313 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 BLOC1S5Q8TDH9 187 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 ADAM33Q9BZ11 813 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 ANAPC2Q9UJX6 822 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 TNPO3Q9Y5L0 923 aaKnown RBP19.77■□□□□ 0.76
HDAC4-215ENST00000543185 ARID1BQ8NFD5 2236 aaPredicted RBP19.77■□□□□ 0.76
HDAC4-215ENST00000543185 GSG1L2A8MUP6 293 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 F5H6K3 240 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 MDM4O15151 490 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 FOXN1O15353 648 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 ACOT2P49753 483 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 KLRC3Q07444 240 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 SLC25A41Q8N5S1 370 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 MASTLQ96GX5 879 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 ANKZF1Q9H8Y5 726 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 NMRK2Q9NPI5 230 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 PHF11Q9UIL8 331 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 PLK4O00444 970 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 GSTM5P46439 218 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 RENBPP51606 427 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 RBM43Q6ZSC3 357 aaKnown RBP19.77■□□□□ 0.76
HDAC4-215ENST00000543185 SERAC1Q96JX3 654 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 TEKT5Q96M29 485 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 TEX13BQ9BXU2 312 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 TMEM260Q9NX78 707 aa19.77■□□□□ 0.76
HDAC4-215ENST00000543185 OGNP20774 298 aaKnown RBP19.77■□□□□ 0.75
HDAC4-215ENST00000543185 NAALADL1Q9UQQ1 740 aa19.77■□□□□ 0.75
HDAC4-215ENST00000543185 CLUHO75153 1309 aa19.77■□□□□ 0.75
HDAC4-215ENST00000543185 ELF3P78545 371 aaPredicted RBP19.77■□□□□ 0.75
HDAC4-215ENST00000543185 PKN1Q16512 942 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 ZCCHC9Q8N567 271 aaKnown RBP19.76■□□□□ 0.75
HDAC4-215ENST00000543185 PSMD12O00232 456 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-215ENST00000543185 TADA2AO75478 443 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 SSTR3P32745 418 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-215ENST00000543185 FAM196AQ6ZSG2 479 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 C17orf50Q8WW18 174 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 PMPCBO75439 489 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 CDH17Q12864 832 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 RASSF5Q8WWW0 418 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 SPATA5L1Q9BVQ7 753 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 PTGES3LE9PB15 166 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 HOXD10P28358 340 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 SEPHS2Q99611 448 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 CYP1A1P04798 512 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-215ENST00000543185 ALDH1A3P47895 512 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 ENPEPQ07075 957 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 STK32CQ86UX6 486 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 TRPV1Q8NER1 839 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 ZHX1-C8orf76Q96EF9 292 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 CMTM6Q9NX76 183 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 ASAP1Q9ULH1 1129 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 E2F8A0AVK6 867 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 ERI2A8K979 691 aaKnown RBP19.76■□□□□ 0.75
HDAC4-215ENST00000543185 GRAP2O75791 330 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 POTEHQ6S545 545 aa19.76■□□□□ 0.75
HDAC4-215ENST00000543185 BHLHE22Q8NFJ8 381 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms