RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 TTC13Q8NBP0 860 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 ADAMTS19Q8TE59 1207 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 WBP2Q969T9 261 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 TBC1D31Q96DN5 1066 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 PABPC5Q96DU9 382 aaKnown RBP11.02□□□□□ -0.65
DDB1-221ENST00000543162 RIPOR3Q96MK2 946 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 ZSWIM3Q96MP5 696 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 PRMT1Q99873 361 aaKnown RBP11.02□□□□□ -0.65
DDB1-221ENST00000543162 DDX50Q9BQ39 737 aaKnown RBP11.02□□□□□ -0.65
DDB1-221ENST00000543162 SMG9Q9H0W8 520 aaKnown RBP11.02□□□□□ -0.65
DDB1-221ENST00000543162 ARHGEF4Q9NR80 690 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 HOMER3Q9NSC5 361 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 RBM12Q9NTZ6 932 aaKnown RBP11.02□□□□□ -0.65
DDB1-221ENST00000543162 TDP1Q9NUW8 608 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 AGO1Q9UL18 857 aaKnown RBP11.02□□□□□ -0.65
DDB1-221ENST00000543162 VANGL2Q9ULK5 521 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 SH3BP1Q9Y3L3 701 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 NR2E1Q9Y466 385 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 GOLGA6L7A0A1B0GV03 622 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 F5H5T6 163 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 APOC4-APOC2K7ER74 178 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 LEFTY2O00292 366 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 FGF10O15520 208 aaPredicted RBP11.01□□□□□ -0.65
DDB1-221ENST00000543162 APOC2P02655 101 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 ERCC2P18074 760 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 TGM2P21980 687 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 ZXDBP98169 803 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 DLX2Q07687 328 aaPredicted RBP11.01□□□□□ -0.65
DDB1-221ENST00000543162 COL19A1Q14993 1142 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 ADGRF1Q5T601 910 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 FBXL22Q6P050 247 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 C1orf228Q6PIY5 440 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 TMCO3Q6UWJ1 677 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 Q6ZNB5 142 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 HTR3DQ70Z44 454 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 GET4Q7L5D6 327 aaPredicted RBP11.01□□□□□ -0.65
DDB1-221ENST00000543162 ARID3BQ8IVW6 561 aaPredicted RBP11.01□□□□□ -0.65
DDB1-221ENST00000543162 NPAS3Q8IXF0 933 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 KLHL7Q8IXQ5 586 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 ZNF683Q8IZ20 524 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 ZDHHC14Q8IZN3 488 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 LGI2Q8N0V4 545 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 PLD5Q8N7P1 536 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 LRRN4CLQ8ND94 238 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 ZSCAN18Q8TBC5 510 aaPredicted RBP11.01□□□□□ -0.65
DDB1-221ENST00000543162 SH3RF2Q8TEC5 729 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 C1orf54Q8WWF1 131 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 ATG4AQ8WYN0 398 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 P3H4Q92791 437 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 USP13Q92995 863 aaPredicted RBP11.01□□□□□ -0.65
DDB1-221ENST00000543162 MAGOHBQ96A72 148 aaKnown RBP11.01□□□□□ -0.65
DDB1-221ENST00000543162 HAUS1Q96CS2 278 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 RPRD1AQ96P16 312 aaPredicted RBP11.01□□□□□ -0.65
DDB1-221ENST00000543162 S1PR5Q9H228 398 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 CATSPERBQ9H7T0 1116 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 CDH22Q9UJ99 828 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 ZNF510Q9Y2H8 683 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 R3HDM2Q9Y2K5 976 aaKnown RBP11.01□□□□□ -0.65
DDB1-221ENST00000543162 HEY1Q9Y5J3 304 aa11.01□□□□□ -0.65
DDB1-221ENST00000543162 HELZP42694 1942 aaKnown RBP11.01□□□□□ -0.65
DDB1-221ENST00000543162 IGLV3-10A0A075B6K4 115 aa11□□□□□ -0.65
DDB1-221ENST00000543162 E2F8A0AVK6 867 aa11□□□□□ -0.65
DDB1-221ENST00000543162 SCAMP3O14828 347 aaKnown RBP11□□□□□ -0.65
DDB1-221ENST00000543162 DCLK1O15075 740 aa11□□□□□ -0.65
DDB1-221ENST00000543162 GREM1O60565 184 aa11□□□□□ -0.65
DDB1-221ENST00000543162 PHF2O75151 1096 aa11□□□□□ -0.65
DDB1-221ENST00000543162 PRAMEF12O95522 483 aa11□□□□□ -0.65
DDB1-221ENST00000543162 PECAM1P16284 738 aaPredicted RBP11□□□□□ -0.65
DDB1-221ENST00000543162 WEE1P30291 646 aa11□□□□□ -0.65
DDB1-221ENST00000543162 HOXC13P31276 330 aa11□□□□□ -0.65
DDB1-221ENST00000543162 SLC6A4P31645 630 aa11□□□□□ -0.65
DDB1-221ENST00000543162 CHRNA3P32297 505 aa11□□□□□ -0.65
DDB1-221ENST00000543162 LTBRP36941 435 aa11□□□□□ -0.65
DDB1-221ENST00000543162 MTHFRP42898 656 aa11□□□□□ -0.65
DDB1-221ENST00000543162 OTUD4Q01804 1114 aaKnown RBP11□□□□□ -0.65
DDB1-221ENST00000543162 SNX1Q13596 522 aa11□□□□□ -0.65
DDB1-221ENST00000543162 CCNG2Q16589 344 aa11□□□□□ -0.65
DDB1-221ENST00000543162 CYP1B1Q16678 543 aa11□□□□□ -0.65
DDB1-221ENST00000543162 FAM133BQ5BKY9 247 aaKnown RBP11□□□□□ -0.65
DDB1-221ENST00000543162 RABGAP1LQ5R372 815 aa11□□□□□ -0.65
DDB1-221ENST00000543162 NCBP2-AS2Q69YL0 99 aa11□□□□□ -0.65
DDB1-221ENST00000543162 GPR153Q6NV75 609 aa11□□□□□ -0.65
DDB1-221ENST00000543162 RFWD3Q6PCD5 774 aa11□□□□□ -0.65
DDB1-221ENST00000543162 NPNTQ6UXI9 565 aa11□□□□□ -0.65
DDB1-221ENST00000543162 ACTL9Q8TC94 416 aa11□□□□□ -0.65
DDB1-221ENST00000543162 MYLIPQ8WY64 445 aa11□□□□□ -0.65
DDB1-221ENST00000543162 FGF13Q92913 245 aa11□□□□□ -0.65
DDB1-221ENST00000543162 MSLNLQ96KJ4 702 aa11□□□□□ -0.65
DDB1-221ENST00000543162 KRT12Q99456 494 aa11□□□□□ -0.65
DDB1-221ENST00000543162 FAM118BQ9BPY3 351 aa11□□□□□ -0.65
DDB1-221ENST00000543162 FRMD8P1Q9BZ68 369 aaPredicted RBP11□□□□□ -0.65
DDB1-221ENST00000543162 ZYG11BQ9C0D3 744 aa11□□□□□ -0.65
DDB1-221ENST00000543162 DDX47Q9H0S4 455 aaKnown RBP11□□□□□ -0.65
DDB1-221ENST00000543162 KIF9Q9HAQ2 790 aa11□□□□□ -0.65
DDB1-221ENST00000543162 ETNK2Q9NVF9 386 aa11□□□□□ -0.65
DDB1-221ENST00000543162 DONSONQ9NYP3 566 aa11□□□□□ -0.65
DDB1-221ENST00000543162 GDE1Q9NZC3 331 aa11□□□□□ -0.65
DDB1-221ENST00000543162 MPP6Q9NZW5 540 aa11□□□□□ -0.65
DDB1-221ENST00000543162 SAE1Q9UBE0 346 aaPredicted RBP11□□□□□ -0.65
DDB1-221ENST00000543162 PPARGC1AQ9UBK2 798 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms