RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 SH3BP1Q9Y3L3 701 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 ZSCAN12O43309 604 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 RNF8O76064 485 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 CNTN5O94779 1100 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 LRIG2O94898 1065 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 FTCDO95954 541 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 PENKP01210 267 aaPredicted RBP11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 APOEP02649 317 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 CYP17A1P05093 508 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 GDI1P31150 447 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 HOXC13P31276 330 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 CTNNA1P35221 906 aaKnown RBP11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 AIF1P55008 147 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 RPS24P62847 133 aaKnown RBP11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 DHCR24Q15392 516 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 ARHGAP29Q52LW3 1261 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 BOLA3Q53S33 107 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 ALFQ53S48 1182 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 LY6G5CQ5SRR4 150 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 ERMARDQ5T6L9 678 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 DCAF12L1Q5VU92 463 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 ASTLQ6HA08 431 aaPredicted RBP11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 SND1Q7KZF4 910 aaKnown RBP eCLIP11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 POLNQ7Z5Q5 900 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 NLRP14Q86W24 1093 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 C12orf40Q86WS4 652 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 PSTKQ8IV42 348 aaKnown RBP11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 ATP6V0D2Q8N8Y2 350 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 TTC16Q8NEE8 873 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 WFDC5Q8TCV5 224 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 IRF7Q92985 503 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 HERPUD2Q9BSE4 406 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 TRMT61BQ9BVS5 477 aaKnown RBP11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 KLC2Q9H0B6 622 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 SIK2Q9H0K1 926 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 ZWILCHQ9H900 591 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 PCDH18Q9HCL0 1135 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 TRPV5Q9NQA5 729 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 SPHK2Q9NRA0 654 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 KLHL11Q9NVR0 708 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 GTSE1Q9NYZ3 720 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 OR12D3Q9UGF7 316 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 LSM7Q9UK45 103 aaKnown RBP11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 FBXO10Q9UK96 956 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 PACSIN2Q9UNF0 486 aaPredicted RBP11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 AP4E1Q9UPM8 1137 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 ZNF510Q9Y2H8 683 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 PCDHA3Q9Y5H8 950 aa11.04□□□□□ -0.64
NPIPB3-210ENST00000542817 E9PAM4 449 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 TRIM24O15164 1050 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 PRPSAP2O60256 369 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 TSPAN3O60637 253 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 CHRM1P11229 460 aaPredicted RBP11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 CTNNA2P26232 953 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 HOXD9P28356 352 aaPredicted RBP11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 SLC11A2P49281 568 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 MMRN1Q13201 1228 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 TDGQ13569 410 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 DPYSQ14117 519 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 PDGFRLQ15198 375 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 MEI1Q5TIA1 1274 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 RNF135Q8IUD6 432 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 ETFBKMTQ8IXQ9 262 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 CFAP52Q8N1V2 620 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 TXLNBQ8N3L3 684 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 OR52K2Q8NGK3 314 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 RNF34Q969K3 372 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 FAF2Q96CS3 445 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 OTUB2Q96DC9 234 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 WDR24Q96S15 920 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 NCAPGQ9BPX3 1015 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 TLR10Q9BXR5 811 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 ECT2Q9H8V3 914 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 SLC2A4RGQ9NR83 387 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 NDFIP2Q9NV92 336 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 CWC15Q9P013 229 aaKnown RBP11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 TBC1D14Q9P2M4 693 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 VANGL2Q9ULK5 521 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 CUL9Q8IWT3 2517 aa11.03□□□□□ -0.64
NPIPB3-210ENST00000542817 WDFY4Q6ZS81 3184 aa11.02□□□□□ -0.64
NPIPB3-210ENST00000542817 ANTXRLA6NF34 631 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 HOXC11O43248 304 aaPredicted RBP11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 PSTPIP1O43586 416 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 CISD3P0C7P0 127 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 SRFP11831 508 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 GOT1P17174 413 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 SOX9P48436 509 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 NAP1L1P55209 391 aaKnown RBP11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 ADCY2Q08462 1091 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 RUNX3Q13761 415 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 DPYSL3Q14195 570 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 ARL13BQ3SXY8 428 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 FSCBQ5H9T9 825 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 TJAP1Q5JTD0 557 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 CXorf57Q6NSI4 855 aaKnown RBP11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 AADACL2Q6P093 401 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 TXNDC11Q6PKC3 985 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 TPGS1Q6ZTW0 290 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms