RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 LRRC31Q6UY01 552 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 SHKBP1Q8TBC3 707 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 ZNF707Q96C28 371 aaPredicted RBP12.74□□□□□ -0.37
DDB1-209ENST00000537877 ZFRQ96KR1 1074 aaKnown RBP12.74□□□□□ -0.37
DDB1-209ENST00000537877 RNF38Q9H0F5 515 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 NSUN3Q9H649 340 aaKnown RBP12.74□□□□□ -0.37
DDB1-209ENST00000537877 HCFC1R1Q9NWW0 138 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 DONSONQ9NYP3 566 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 DNMT3BQ9UBC3 853 aaKnown RBP12.74□□□□□ -0.37
DDB1-209ENST00000537877 PPARGC1AQ9UBK2 798 aaKnown RBP12.74□□□□□ -0.37
DDB1-209ENST00000537877 DMGDHQ9UI17 866 aaKnown RBP12.74□□□□□ -0.37
DDB1-209ENST00000537877 XPO7Q9UIA9 1087 aaKnown RBP12.74□□□□□ -0.37
DDB1-209ENST00000537877 ZNF148Q9UQR1 794 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 UTP11Q9Y3A2 253 aaKnown RBP12.74□□□□□ -0.37
DDB1-209ENST00000537877 SNX10Q9Y5X0 201 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 IGLV3-10A0A075B6K4 115 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 CCDC195A0A1B0GUA6 201 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 WASH4PA8MWX3 477 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 HACD1B0YJ81 288 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 BHMG1C9JSJ3 638 aaPredicted RBP12.73□□□□□ -0.37
DDB1-209ENST00000537877 MFSD11O43934 449 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 CKMP06732 381 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 SRGAP2BP0DMP2 458 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 RBP3P10745 1247 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 HDCP19113 662 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 TNFRSF8P28908 595 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 GGCXP38435 758 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 KCNJ1P48048 391 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 AUHQ13825 339 aaKnown RBP12.73□□□□□ -0.37
DDB1-209ENST00000537877 PTK6Q13882 451 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 LRIT3Q3SXY7 679 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 C1orf228Q6PIY5 440 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 NPNTQ6UXI9 565 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 CHSY1Q86X52 802 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 DDX42Q86XP3 938 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDB1-209ENST00000537877 CDKL3Q8IVW4 592 aaPredicted RBP12.73□□□□□ -0.37
DDB1-209ENST00000537877 IFT20Q8IY31 132 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 ZNF683Q8IZ20 524 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 LZTR1Q8N653 840 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 ARL14EPQ8N8R7 260 aaPredicted RBP12.73□□□□□ -0.37
DDB1-209ENST00000537877 CCHCR1Q8TD31 782 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 OLFM3Q96PB7 478 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 PRMT1Q99873 361 aaKnown RBP12.73□□□□□ -0.37
DDB1-209ENST00000537877 FAM118BQ9BPY3 351 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 DDX50Q9BQ39 737 aaKnown RBP12.73□□□□□ -0.37
DDB1-209ENST00000537877 ZNF576Q9H609 170 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 RETREG1Q9H6L5 497 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 TASP1Q9H6P5 420 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 ETNK2Q9NVF9 386 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 DTLQ9NZJ0 730 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 LMCD1Q9NZU5 365 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 RAB21Q9UL25 225 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 HEY1Q9Y5J3 304 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 CPQQ9Y646 472 aa12.73□□□□□ -0.37
DDB1-209ENST00000537877 F5H5T6 163 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 RFXAPO00287 272 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 NCAM2O15394 837 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 RHOQP17081 205 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 TACR2P21452 398 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 CORO1AP31146 461 aaKnown RBP12.72□□□□□ -0.37
DDB1-209ENST00000537877 CCR2P41597 374 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 SLC7A5Q01650 507 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 GBE1Q04446 702 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 PDK1Q15118 436 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 PPP1R7Q15435 360 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 PRSS36Q5K4E3 855 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 ARTNQ5T4W7 220 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 GPR158Q5T848 1215 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 RAP1GAP2Q684P5 730 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 RWDD4Q6NW29 188 aaKnown RBP12.72□□□□□ -0.37
DDB1-209ENST00000537877 TMEM184AQ6ZMB5 413 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 ALLCQ8N6M5 410 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 RTL3Q8N8U3 475 aaKnown RBP12.72□□□□□ -0.37
DDB1-209ENST00000537877 MAB21L3Q8N8X9 362 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 VN1R2Q8NFZ6 395 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 SEC14L1Q92503 715 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 SMG7Q92540 1137 aaKnown RBP12.72□□□□□ -0.37
DDB1-209ENST00000537877 QKIQ96PU8 341 aaKnown RBP eCLIP12.72□□□□□ -0.37
DDB1-209ENST00000537877 SLC22A12Q96S37 553 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 PNKPQ96T60 521 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 ERP44Q9BS26 406 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 TRIM51Q9BSJ1 452 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 PARD6BQ9BYG5 372 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 ZYG11BQ9C0D3 744 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 EPC1Q9H2F5 836 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 PIDD1Q9HB75 910 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 GDF3Q9NR23 364 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 SAE1Q9UBE0 346 aaPredicted RBP12.72□□□□□ -0.37
DDB1-209ENST00000537877 STOML2Q9UJZ1 356 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 LSM7Q9UK45 103 aaKnown RBP12.72□□□□□ -0.37
DDB1-209ENST00000537877 VANGL2Q9ULK5 521 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 ARHGAP26Q9UNA1 814 aa12.72□□□□□ -0.37
DDB1-209ENST00000537877 BCLAF3A2AJT9 711 aaKnown RBP12.71□□□□□ -0.37
DDB1-209ENST00000537877 DRGXA6NNA5 263 aa12.71□□□□□ -0.37
DDB1-209ENST00000537877 H7C0C1 242 aa12.71□□□□□ -0.37
DDB1-209ENST00000537877 PPP1R12AO14974 1030 aaPredicted RBP12.71□□□□□ -0.37
DDB1-209ENST00000537877 MOSPD3O75425 235 aa12.71□□□□□ -0.37
DDB1-209ENST00000537877 IRF1P10914 325 aa12.71□□□□□ -0.37
DDB1-209ENST00000537877 MX2P20592 715 aa12.71□□□□□ -0.37
DDB1-209ENST00000537877 STIP1P31948 543 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms