RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 VANGL2Q9ULK5 521 aa25.06■■□□□ 1.6
HMGA2-208ENST00000537429 ENC1O14682 589 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 LRIG2O94898 1065 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 KDELR1P24390 212 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 CDH6P55285 790 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 RWDD2BP57060 319 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 GRM2Q14416 872 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 PDK2Q15119 407 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 PPP6R3Q5H9R7 873 aaPredicted RBP25.05■■□□□ 1.6
HMGA2-208ENST00000537429 FBXL22Q6P050 247 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 ADHFE1Q8IWW8 467 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 KCTD6Q8NC69 237 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 MYEOVQ96EZ4 313 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 ASB2Q96Q27 587 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 KCNK12Q9HB15 430 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 IGSF9Q9P2J2 1179 aa25.05■■□□□ 1.6
HMGA2-208ENST00000537429 E9PAM4 449 aa25.04■■□□□ 1.6
HMGA2-208ENST00000537429 F5H5T6 163 aa25.04■■□□□ 1.6
HMGA2-208ENST00000537429 ZRANB2O95218 330 aaKnown RBP eCLIP25.04■■□□□ 1.6
HMGA2-208ENST00000537429 CD48P09326 243 aa25.04■■□□□ 1.6
HMGA2-208ENST00000537429 IFNAR2P48551 515 aa25.04■■□□□ 1.6
HMGA2-208ENST00000537429 ZNF135P52742 658 aaPredicted RBP25.04■■□□□ 1.6
HMGA2-208ENST00000537429 EML3Q32P44 896 aa25.04■■□□□ 1.6
HMGA2-208ENST00000537429 C5orf22Q49AR2 442 aa25.04■■□□□ 1.6
HMGA2-208ENST00000537429 LGI2Q8N0V4 545 aa25.04■■□□□ 1.6
HMGA2-208ENST00000537429 EXD1Q8NHP7 514 aa25.04■■□□□ 1.6
HMGA2-208ENST00000537429 ZFYVE19Q96K21 471 aa25.04■■□□□ 1.6
HMGA2-208ENST00000537429 C16orf45Q96MC5 204 aaPredicted RBP25.04■■□□□ 1.6
HMGA2-208ENST00000537429 TRMT61BQ9BVS5 477 aaKnown RBP25.04■■□□□ 1.6
HMGA2-208ENST00000537429 IGLV3-10A0A075B6K4 115 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 LRRD1A4D1F6 860 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 C3orf70A6NLC5 250 aaPredicted RBP25.03■■□□□ 1.6
HMGA2-208ENST00000537429 TRDMT1O14717 391 aaKnown RBP25.03■■□□□ 1.6
HMGA2-208ENST00000537429 CHADO15335 359 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 CREB3O43889 395 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 SRGAP2O75044 1071 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 KRT1P04264 644 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 IL4RP24394 825 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 VCPP55072 806 aaKnown RBP25.03■■□□□ 1.6
HMGA2-208ENST00000537429 DPYSL3Q14195 570 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 KRT81Q14533 505 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 TRIM68Q6AZZ1 485 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 LRRC31Q6UY01 552 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 MAP7D3Q8IWC1 876 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 TSC1Q92574 1164 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 PRICKLE1Q96MT3 831 aaPredicted RBP25.03■■□□□ 1.6
HMGA2-208ENST00000537429 EPAS1Q99814 870 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 CWC15Q9P013 229 aaKnown RBP25.03■■□□□ 1.6
HMGA2-208ENST00000537429 NEU3Q9UQ49 428 aa25.03■■□□□ 1.6
HMGA2-208ENST00000537429 DRGXA6NNA5 263 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 PI4K2BG5E9Z4 385 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 FANCGO15287 622 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 ATP1A1P05023 1023 aaKnown RBP25.02■■□□□ 1.6
HMGA2-208ENST00000537429 HTR7P34969 479 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 DNA2P51530 1060 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 ZP2Q05996 745 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 PDGFRLQ15198 375 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 VSIG1Q86XK7 387 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 RCOR2Q8IZ40 523 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 IGSF8Q969P0 613 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 RNF25Q96BH1 459 aaPredicted RBP25.02■■□□□ 1.6
HMGA2-208ENST00000537429 RCOR3Q9P2K3 495 aaPredicted RBP25.02■■□□□ 1.6
HMGA2-208ENST00000537429 PPARGC1AQ9UBK2 798 aaKnown RBP25.02■■□□□ 1.6
HMGA2-208ENST00000537429 TSPAN3O60637 253 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 GOT1P17174 413 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 GDI1P31150 447 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 HOXC13P31276 330 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 ARL4AP40617 200 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 HCAR3P49019 387 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 SGSHP51688 502 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 ODF2Q5BJF6 829 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 DCAF12L1Q5VU92 463 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 TMEM25Q86YD3 366 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 SLC44A3Q8N4M1 653 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 IRF7Q92985 503 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 TMA16Q96EY4 203 aaKnown RBP25.02■■□□□ 1.6
HMGA2-208ENST00000537429 P2RY11Q96G91 374 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 RBM41Q96IZ5 413 aaKnown RBP25.02■■□□□ 1.6
HMGA2-208ENST00000537429 RPRD1AQ96P16 312 aaPredicted RBP25.02■■□□□ 1.6
HMGA2-208ENST00000537429 ZNF670Q9BS34 389 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 CALN1Q9BXU9 219 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 SPHK2Q9NRA0 654 aa25.02■■□□□ 1.6
HMGA2-208ENST00000537429 ZNF487B1APH4 448 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 H3BRJ5 948 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 EEF2KO00418 725 aaKnown RBP25.01■■□□□ 1.59
HMGA2-208ENST00000537429 ASGR2P07307 311 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 PYGMP11217 842 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 BMP1P13497 986 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 TPI1P60174 286 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 MMRN1Q13201 1228 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 TAZQ16635 292 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 MPPE1Q53F39 396 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 RHBDF2Q6PJF5 856 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 MFSD7Q6UXD7 560 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 SYT10Q6XYQ8 523 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 TPGS1Q6ZTW0 290 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 ATP2A3Q93084 1043 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 TBC1D31Q96DN5 1066 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 CSPG4P5Q96PW8 444 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 EBF3Q9H4W6 596 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms