RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 DHRS13Q6UX07 377 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 PDZD4Q76G19 769 aaPredicted RBP4.38□□□□□ -1.71
YBX3-205ENST00000536107 TRMT1LQ7Z2T5 733 aaKnown RBP4.38□□□□□ -1.71
YBX3-205ENST00000536107 RD3Q7Z3Z2 195 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 RABEPKQ7Z6M1 372 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 GLRX5Q86SX6 157 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 CEP57Q86XR8 500 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 CKAP2LQ8IYA6 745 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 ADGRF4Q8IZF3 695 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 ZNF276Q8N554 614 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 DEFB119Q8N690 84 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 RPLP0P6Q8NHW5 317 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 PROKR1Q8TCW9 393 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 GIPC2Q8TF65 315 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 THAP3Q8WTV1 239 aaPredicted RBP4.38□□□□□ -1.71
YBX3-205ENST00000536107 E2F7Q96AV8 911 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 ZFYVE19Q96K21 471 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 INPP4AQ96PE3 977 aaPredicted RBP4.38□□□□□ -1.71
YBX3-205ENST00000536107 MAP7D2Q96T17 732 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 CDC6Q99741 560 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 COLEC11Q9BWP8 271 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 AMNQ9BXJ7 453 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 NAPBQ9H115 298 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 MARCH5Q9NX47 278 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 MAP3K20Q9NYL2 800 aaKnown RBP4.38□□□□□ -1.71
YBX3-205ENST00000536107 GTSE1Q9NYZ3 720 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 MYH8P13535 1937 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 SETD2Q9BYW2 2564 aaPredicted RBP4.38□□□□□ -1.71
YBX3-205ENST00000536107 C2orf16Q68DN1 1984 aa4.38□□□□□ -1.71
YBX3-205ENST00000536107 ATMQ13315 3056 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 COL5A1P20908 1838 aaPredicted RBP4.37□□□□□ -1.71
YBX3-205ENST00000536107 FNDC1Q4ZHG4 1894 aaPredicted RBP4.37□□□□□ -1.71
YBX3-205ENST00000536107 F5P12259 2224 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 MYH15Q9Y2K3 1946 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 WDR27A2RRH5 827 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 CHADO15335 359 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 FAM20BO75063 409 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 ATP9AO75110 1047 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 GPR32O75388 356 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 CSDE1O75534 798 aaKnown RBP4.37□□□□□ -1.71
YBX3-205ENST00000536107 ALDH1A2O94788 518 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 ABHD16AO95870 558 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 TMOD1P28289 359 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 HOXD12P35452 270 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 HNF1BP35680 557 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 SMAD1Q15797 465 aaKnown RBP4.37□□□□□ -1.71
YBX3-205ENST00000536107 PLEKHG6Q3KR16 790 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 RABL3Q5HYI8 236 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 HECTD2Q5U5R9 776 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 FUT10Q6P4F1 479 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 SYT13Q7L8C5 426 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 PLPPR4Q7Z2D5 763 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 GSPT2Q8IYD1 628 aaKnown RBP4.37□□□□□ -1.71
YBX3-205ENST00000536107 IFNL3Q8IZI9 196 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 ENGASEQ8NFI3 743 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 RLN3Q8WXF3 142 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 RABGGTAQ92696 567 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 OSBP2Q969R2 916 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 TCEAL4Q96EI5 215 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 MOCOSQ96EN8 888 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 CDHR1Q96JP9 859 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 MBOAT7Q96N66 472 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 IL1RAPL2Q9NP60 686 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 SNTG2Q9NY99 539 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 BCCIPQ9P287 314 aaKnown RBP eCLIP4.37□□□□□ -1.71
YBX3-205ENST00000536107 ARHGAP28Q9P2N2 729 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 TRPS1Q9UHF7 1281 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 CDC42EP3Q9UKI2 254 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 PILRBQ9UKJ0 227 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 HS3ST4Q9Y661 456 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 ZFHX3Q15911 3703 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 COL6A6A6NMZ7 2263 aa4.37□□□□□ -1.71
YBX3-205ENST00000536107 LRRK2Q5S007 2527 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 ASCC3Q8N3C0 2202 aaKnown RBP4.36□□□□□ -1.71
YBX3-205ENST00000536107 F8W810 466 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 M0R2C6 588 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 PRRG1O14668 218 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 KLK10O43240 276 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 GPAA1O43292 621 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 B3GALT2O43825 422 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 HBP1O60381 514 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 BRINP1O60477 761 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 DIAPH2O60879 1101 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 EGFP01133 1207 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 POU2F2P09086 479 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 MYL4P12829 197 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 DARSP14868 501 aaKnown RBP4.36□□□□□ -1.71
YBX3-205ENST00000536107 GJA1P17302 382 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 GRK2P25098 689 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 ELF1P32519 619 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 GRK3P35626 688 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 RAB27AP51159 221 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 CLCN3P51790 818 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 BYSLQ13895 437 aaKnown RBP4.36□□□□□ -1.71
YBX3-205ENST00000536107 PSMD5Q16401 504 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 ITPRIPL2Q3MIP1 535 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 SV2CQ496J9 727 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 ARHGAP29Q52LW3 1261 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 ZNF484Q5JVG2 852 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 TMEM200BQ69YZ2 307 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms