RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 CYB5D2Q8WUJ1 264 aa16.99■□□□□ 0.31
ATL3-202ENST00000535789 MYO19Q96H55 970 aa16.99■□□□□ 0.31
ATL3-202ENST00000535789 FAM204AQ9H8W3 233 aa16.99■□□□□ 0.31
ATL3-202ENST00000535789 GRPEL1Q9HAV7 217 aa16.99■□□□□ 0.31
ATL3-202ENST00000535789 ELOVL2Q9NXB9 296 aa16.99■□□□□ 0.31
ATL3-202ENST00000535789 BCCIPQ9P287 314 aaKnown RBP eCLIP16.99■□□□□ 0.31
ATL3-202ENST00000535789 GGA2Q9UJY4 613 aa16.99■□□□□ 0.31
ATL3-202ENST00000535789 DOCK9Q9BZ29 2069 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 CACNA1EQ15878 2313 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 SYNJ2BP-COX16A0A087WUM0 186 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 GDF9O60383 454 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 LRP3O75074 770 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 ALDH1A2O94788 518 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 CYP1A1P04798 512 aaPredicted RBP16.98■□□□□ 0.31
ATL3-202ENST00000535789 PABPC1P11940 636 aaKnown RBP16.98■□□□□ 0.31
ATL3-202ENST00000535789 HLA-EP13747 358 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 TACR2P21452 398 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 FLT3P36888 993 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 COPAP53621 1224 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 LMAN2Q12907 356 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 EIF4HQ15056 248 aaKnown RBP16.98■□□□□ 0.31
ATL3-202ENST00000535789 SF3A2Q15428 464 aaKnown RBP16.98■□□□□ 0.31
ATL3-202ENST00000535789 CSRP2Q16527 193 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 USP39Q53GS9 565 aaKnown RBP16.98■□□□□ 0.31
ATL3-202ENST00000535789 EFHC1Q5JVL4 640 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 FKBP15Q5T1M5 1219 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 MPP7Q5T2T1 576 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 NAA35Q5VZE5 725 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 TCEAL6Q6IPX3 200 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 PRR23CQ6ZRP0 262 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 NUDT18Q6ZVK8 323 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 CHST9Q7L1S5 443 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 CIR1Q86X95 450 aaPredicted RBP16.98■□□□□ 0.31
ATL3-202ENST00000535789 ZNF366Q8N895 744 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 HJURPQ8NCD3 748 aaPredicted RBP16.98■□□□□ 0.31
ATL3-202ENST00000535789 TMEM35BQ8NCS4 154 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 CPA5Q8WXQ8 436 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 TCEAL3Q969E4 200 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 LOXL4Q96JB6 756 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 MRGPRX1Q96LB2 322 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 NOX5Q96PH1 765 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 PCDHB18PQ96TA0 734 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 NPY6RQ99463 290 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 TRIM62Q9BVG3 475 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 CIPCQ9C0C6 399 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 MKRN2Q9H000 416 aaKnown RBP16.98■□□□□ 0.31
ATL3-202ENST00000535789 PIGVQ9NUD9 493 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 DDIT4Q9NX09 232 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 COX16Q9P0S2 106 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 STIM2Q9P246 746 aa16.98■□□□□ 0.31
ATL3-202ENST00000535789 LSM8O95777 96 aaKnown RBP16.97■□□□□ 0.31
ATL3-202ENST00000535789 APOEP02649 317 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 GBP1P32455 592 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 MPLP40238 635 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 ATXN1P54253 815 aaKnown RBP16.97■□□□□ 0.31
ATL3-202ENST00000535789 CDR2Q01850 454 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 UBXN1Q04323 297 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 RSPO4Q2I0M5 234 aaPredicted RBP16.97■□□□□ 0.31
ATL3-202ENST00000535789 RAB6CQ53S08 254 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 BNIPLQ7Z465 357 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 CHSY1Q86X52 802 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 LGI2Q8N0V4 545 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 NT5C3BQ969T7 300 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 BTN2A3PQ96KV6 586 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 IRX2Q9BZI1 471 aaPredicted RBP16.97■□□□□ 0.31
ATL3-202ENST00000535789 RAB6CQ9H0N0 254 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 TMEM245Q9H330 911 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 TMPRSS4Q9NRS4 437 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 DLL3Q9NYJ7 618 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 SPTBN2O15020 2390 aa16.97■□□□□ 0.31
ATL3-202ENST00000535789 ASCC3Q8N3C0 2202 aaKnown RBP16.97■□□□□ 0.31
ATL3-202ENST00000535789 IGHV1OR15-9A0A0B4J2B8 117 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 BCLAF3A2AJT9 711 aaKnown RBP16.96■□□□□ 0.31
ATL3-202ENST00000535789 AP5Z1O43299 807 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 LUC7L3O95232 432 aaKnown RBP16.96■□□□□ 0.31
ATL3-202ENST00000535789 NOS2P35228 1153 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 MATKP42679 507 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 PTGER3P43115 390 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 ID4P47928 161 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 CDK17Q00537 523 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 CENPCQ03188 943 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 PTP4A2Q12974 167 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 FAM102AQ5T9C2 384 aaPredicted RBP16.96■□□□□ 0.31
ATL3-202ENST00000535789 MBLAC2Q68D91 279 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 MFN1Q8IWA4 741 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 AHI1Q8N157 1196 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 FIBINQ8TAL6 211 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 WFIKKN2Q8TEU8 576 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 C18orf8Q96DM3 657 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 TBCBQ99426 244 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 SYNCQ9H7C4 482 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 TMEM59LQ9UK28 342 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 CEP83Q9Y592 693 aa16.96■□□□□ 0.31
ATL3-202ENST00000535789 ATXN2Q99700 1313 aaKnown RBP16.96■□□□□ 0.3
ATL3-202ENST00000535789 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 PATE3B3GLJ2 98 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 GOLGA8SH3BPF8 625 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 M0QYT0 321 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 GJB6O95452 261 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 ADCY5O95622 1261 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms