RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 UVRAGQ9P2Y5 699 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 FBXO10Q9UK96 956 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 CLEC4EQ9ULY5 219 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 TFR2Q9UP52 801 aa12.48□□□□□ -0.41
CHD4-203ENST00000535717 MRPS17Q9Y2R5 130 aaKnown RBP12.48□□□□□ -0.41
CHD4-203ENST00000535717 MIA3Q5JRA6 1907 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 F5H5T6 163 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 PI15O43692 258 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 LRCH4O75427 683 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 RNF8O76064 485 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 CISD3P0C7P0 127 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 DESP17661 470 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 EIF2DP41214 584 aaKnown RBP12.47□□□□□ -0.41
CHD4-203ENST00000535717 KDSRQ06136 332 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 SCAPQ12770 1279 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 FZD5Q13467 585 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 PIGHQ14442 188 aaPredicted RBP12.47□□□□□ -0.41
CHD4-203ENST00000535717 TCEAL1Q15170 157 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 ARL13BQ3SXY8 428 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 MPP7Q5T2T1 576 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 DAB2IPQ5VWQ8 1189 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 ASTLQ6HA08 431 aaPredicted RBP12.47□□□□□ -0.41
CHD4-203ENST00000535717 SLFN11Q7Z7L1 901 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 SFTPA1Q8IWL2 248 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 LRRC8AQ8IWT6 810 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 CCDC105Q8IYK2 499 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 ZNF683Q8IZ20 524 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 FBXL6Q8N531 539 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 NIPA2Q8N8Q9 360 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 ACRBPQ8NEB7 543 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 RFFLQ8WZ73 363 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 EZH1Q92800 747 aaPredicted RBP12.47□□□□□ -0.41
CHD4-203ENST00000535717 IGSF8Q969P0 613 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 NTAN1Q96AB6 310 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 C1orf74Q96LT6 269 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 XPO6Q96QU8 1125 aaKnown RBP12.47□□□□□ -0.41
CHD4-203ENST00000535717 PEBP4Q96S96 227 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 PNKPQ96T60 521 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 OSBPL6Q9BZF3 934 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 ARHGEF4Q9NR80 690 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 STIM2Q9P246 746 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 DEC1Q9P2X7 70 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 IP6K2Q9UHH9 426 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 VANGL2Q9ULK5 521 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 SIT1Q9Y3P8 196 aa12.47□□□□□ -0.41
CHD4-203ENST00000535717 KIAA1549LQ6ZVL6 1849 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 RCCD1A6NED2 376 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.46□□□□□ -0.41
CHD4-203ENST00000535717 FAM72CH0Y354 149 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 MYO1FO00160 1098 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 MTA2O94776 668 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 KAT7O95251 611 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 IPO7O95373 1038 aaKnown RBP12.46□□□□□ -0.41
CHD4-203ENST00000535717 EGFP01133 1207 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 CHRNB1P11230 501 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 TCF4P15884 667 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 AOC1P19801 751 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 DRD1P21728 446 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 MIPP30301 263 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 PCK1P35558 622 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 IRAK1P51617 712 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 CLCN5P51795 746 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 GRSF1Q12849 480 aaKnown RBP eCLIP12.46□□□□□ -0.41
CHD4-203ENST00000535717 CCINQ13939 588 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 ACAP1Q15027 740 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 C5orf22Q49AR2 442 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 TMEM31Q5JXX7 168 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 RABGAP1LQ5R372 815 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 ACBD5Q5T8D3 534 aaPredicted RBP12.46□□□□□ -0.41
CHD4-203ENST00000535717 FAM72AQ5TYM5 149 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 GRAMD4Q6IC98 578 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 FAM72DQ6L9T8 149 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 CYP4V2Q6ZWL3 525 aaPredicted RBP12.46□□□□□ -0.41
CHD4-203ENST00000535717 FAM72BQ86X60 149 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 CIR1Q86X95 450 aaPredicted RBP12.46□□□□□ -0.41
CHD4-203ENST00000535717 CPNE8Q86YQ8 564 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 SUGP1Q8IWZ8 645 aaKnown RBP12.46□□□□□ -0.41
CHD4-203ENST00000535717 RHOT2Q8IXI1 618 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 EXOC4Q96A65 974 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 RPRD1AQ96P16 312 aaPredicted RBP12.46□□□□□ -0.41
CHD4-203ENST00000535717 DESI2Q9BSY9 194 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 C1QTNF1Q9BXJ1 281 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 SLC2A11Q9BYW1 496 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 OSBPL2Q9H1P3 480 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 LMAN1LQ9HAT1 526 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 LUC7LQ9NQ29 371 aaKnown RBP12.46□□□□□ -0.41
CHD4-203ENST00000535717 RBM12Q9NTZ6 932 aaKnown RBP12.46□□□□□ -0.41
CHD4-203ENST00000535717 PCSK1NQ9UHG2 260 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 FZD10Q9ULW2 581 aa12.46□□□□□ -0.41
CHD4-203ENST00000535717 IGLV3-10A0A075B6K4 115 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 A0A0A0MRY4 1105 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 TYW5A2RUC4 315 aaKnown RBP12.45□□□□□ -0.42
CHD4-203ENST00000535717 DRGXA6NNA5 263 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 PRR33A8MZF0 331 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 E9PAM4 449 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 K7EQS6 105 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 SRGAP2O75044 1071 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 PROSCO94903 275 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 APODP05090 189 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 DCNP07585 359 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms