RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 ARL14Q8N4G2 192 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 ZNF366Q8N895 744 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 ZSCAN1Q8NBB4 408 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 RBBP8NLQ8NC74 664 aaPredicted RBP6.79□□□□□ -1.32
CD44-237ENST00000534082 OR4C6Q8NH72 309 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 MYCBPAPQ8TBZ2 947 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 MAPK15Q8TD08 544 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 WASF1Q92558 559 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 KCNN1Q92952 543 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 ATXN7L3BQ96GX2 97 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 FAM84AQ96KN4 292 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 ZNF518BQ9C0D4 1074 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 ELOVL4Q9GZR5 314 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 ABCG4Q9H172 646 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 ZNF768Q9H5H4 540 aaKnown RBP6.79□□□□□ -1.32
CD44-237ENST00000534082 FBRSQ9HAH7 460 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 LARSQ9P2J5 1176 aaKnown RBP6.79□□□□□ -1.32
CD44-237ENST00000534082 CHORDC1Q9UHD1 332 aaPredicted RBP6.79□□□□□ -1.32
CD44-237ENST00000534082 CRYBG3Q68DQ2 2970 aa6.79□□□□□ -1.32
CD44-237ENST00000534082 FBN3Q75N90 2809 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 PP2D1A8MPX8 630 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 ANKRD63C9JTQ0 380 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 FFAR2O15552 330 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 SPINT1O43278 529 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 TNFSF15O95150 251 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 IL18RAPO95256 599 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 GP1BAP07359 652 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 KRT19P08727 400 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 PDGFRBP09619 1106 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 ZDHHC11BP0C7U3 371 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 CKMT1AP12532 417 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 GALCP54803 685 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 ORC2Q13416 577 aaPredicted RBP6.78□□□□□ -1.32
CD44-237ENST00000534082 KCNJ12Q14500 433 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 ZNF174Q15697 407 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 FNDC3BQ53EP0 1204 aaKnown RBP6.78□□□□□ -1.32
CD44-237ENST00000534082 SLC45A4Q5BKX6 768 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 FYB2Q5VWT5 728 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 TMEM215Q68D42 235 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 ZNF776Q68DI1 518 aaPredicted RBP6.78□□□□□ -1.32
CD44-237ENST00000534082 CRELD2Q6UXH1 353 aaPredicted RBP6.78□□□□□ -1.32
CD44-237ENST00000534082 RUFY3Q7L099 469 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 HOMEZQ8IX15 550 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 SCAMP5Q8TAC9 235 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 CXorf38Q8TB03 319 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 SPATA20Q8TB22 786 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 GANCQ8TET4 914 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 PIWIL1Q96J94 861 aaKnown RBP6.78□□□□□ -1.32
CD44-237ENST00000534082 SERAC1Q96JX3 654 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 INSM2Q96T92 566 aaPredicted RBP6.78□□□□□ -1.32
CD44-237ENST00000534082 FUCA2Q9BTY2 467 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 OSBPL2Q9H1P3 480 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 ANAPC2Q9UJX6 822 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 AGO2Q9UKV8 859 aaKnown RBP6.78□□□□□ -1.32
CD44-237ENST00000534082 ITGA11Q9UKX5 1188 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 PLAAQ9Y263 795 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 NCKAP1Q9Y2A7 1128 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 ENTPD2Q9Y5L3 495 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 AKAP9Q99996 3911 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 ADGRG4Q8IZF6 3080 aa6.78□□□□□ -1.32
CD44-237ENST00000534082 F8P00451 2351 aa6.77□□□□□ -1.32
CD44-237ENST00000534082 CACNA1DQ01668 2161 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 NPHP3-ACAD11A0A0J9YXS1 232 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 FAM181BA6NEQ2 426 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 LRRC72A6NJI9 287 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 CLDN5O00501 218 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 RTN2O75298 545 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 AGFG2O95081 481 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 CTDNEP1O95476 244 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 TBX18O95935 607 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 CENPBP07199 599 aaPredicted RBP6.77□□□□□ -1.33
CD44-237ENST00000534082 ITGA2BP08514 1039 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 THEGLP0DJG4 465 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 SCP2P22307 547 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 WARSP23381 471 aaKnown RBP6.77□□□□□ -1.33
CD44-237ENST00000534082 CTSOP43234 321 aaPredicted RBP6.77□□□□□ -1.33
CD44-237ENST00000534082 PGFP49763 221 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 SLC5A3P53794 718 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 CYP4F2P78329 520 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 POU5F1Q01860 360 aaKnown RBP6.77□□□□□ -1.33
CD44-237ENST00000534082 PTSQ03393 145 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 TGIF1Q15583 401 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 KRTAP21-3Q3LHN1 58 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 KRT79Q5XKE5 535 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 NAPEPLDQ6IQ20 393 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 USP30Q70CQ3 517 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 DPH6Q7L8W6 267 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 LIMS2Q7Z4I7 341 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 TICAM1Q8IUC6 712 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 SLC25A45Q8N413 288 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 CSGALNACT2Q8N6G5 542 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 IGSF22Q8N9C0 903 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 MFSD2AQ8NA29 543 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 OR2T34Q8NGX1 318 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 CYB5D2Q8WUJ1 264 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 GOLGA1Q92805 767 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 GRAMD1AQ96CP6 724 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 ADNPQ9H2P0 1102 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 TMEM245Q9H330 911 aa6.77□□□□□ -1.33
CD44-237ENST00000534082 PABPC3Q9H361 631 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms