RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 MCF2LO15068 1137 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 DCLK1O15075 740 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 CCL16O15467 120 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 FGF10O15520 208 aaPredicted RBP12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 ZNF189O75820 626 aaPredicted RBP12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 LRIG2O94898 1065 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 CSPG5O95196 566 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 SRGAP2BP0DMP2 458 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 PECAM1P16284 738 aaPredicted RBP12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 EPCAMP16422 314 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 ERCC2P18074 760 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 HDCP19113 662 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 GABRR2P28476 465 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 EPHB2P29323 1055 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 HOXC13P31276 330 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 SLC11A2P49281 568 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 EPHA5P54756 1037 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 CUL1Q13616 776 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 PPP1R7Q15435 360 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 MANEALQ5VSG8 457 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 NCBP2-AS2Q69YL0 99 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 NPNTQ6UXI9 565 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 LRRC31Q6UY01 552 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 GAREM2Q75VX8 874 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 TMC8Q8IU68 726 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 ALLCQ8N6M5 410 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 CCHCR1Q8TD31 782 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 HNRNPLLQ8WVV9 542 aaKnown RBP12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 TIFAQ96CG3 184 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 HAUS1Q96CS2 278 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 TBC1D31Q96DN5 1066 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 CCDC114Q96M63 670 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 CDCA3Q99618 268 aaPredicted RBP12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 FAM118BQ9BPY3 351 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 CORO1BQ9BR76 489 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 PRKD2Q9BZL6 878 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 RETREG1Q9H6L5 497 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 CATSPERBQ9H7T0 1116 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 FAM114A2Q9NRY5 505 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 DONSONQ9NYP3 566 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 PPARGC1AQ9UBK2 798 aaKnown RBP12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 HEY1Q9Y5J3 304 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 SNX10Q9Y5X0 201 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 HS3ST4Q9Y661 456 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 CLUHO75153 1309 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 BCLAF3A2AJT9 711 aaKnown RBP12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 CCDC151A5D8V7 595 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 CFAP69A5D8W1 941 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 DRGXA6NNA5 263 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 HACD1B0YJ81 288 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 H7C0C1 242 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 NCAM2O15394 837 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 ERLIN1O75477 346 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 OLFM2O95897 454 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 MOCS2O96007 188 aaPredicted RBP12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 HMBSP08397 361 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 RBP3P10745 1247 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 MYL4P12829 197 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 H2AFXP16104 143 aaPredicted RBP12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 ATP5OP48047 213 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 RGS19P49795 217 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 KCNQ1P51787 676 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 VSNL1P62760 191 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 AUHQ13825 339 aaKnown RBP12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 PTK6Q13882 451 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 PDK1Q15118 436 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 DUSP6Q16828 381 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 MS4A13Q5J8X5 152 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 RWDD4Q6NW29 188 aaKnown RBP12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 DARS2Q6PI48 645 aaKnown RBP12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 TMCO3Q6UWJ1 677 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 RBM23Q86U06 439 aaKnown RBP12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 PARP9Q8IXQ6 854 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 LZTR1Q8N653 840 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 CCDC89Q8N998 374 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 RSAD2Q8WXG1 361 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 IFT81Q8WYA0 676 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 PPP2R3CQ969Q6 453 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 MRPL38Q96DV4 380 aaKnown RBP12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 DDX50Q9BQ39 737 aaKnown RBP12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 HINFPQ9BQA5 517 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 BRD8Q9H0E9 1235 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 ATXN3LQ9H3M9 355 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 TRPC7Q9HCX4 862 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 ETNK2Q9NVF9 386 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 DTLQ9NZJ0 730 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 NEU2Q9Y3R4 380 aa12.65□□□□□ -0.38
TGFBR3-211ENST00000533370 WASH4PA8MWX3 477 aa12.64□□□□□ -0.39
TGFBR3-211ENST00000533370 E9PAM4 449 aa12.64□□□□□ -0.39
TGFBR3-211ENST00000533370 SGK1O00141 431 aa12.64□□□□□ -0.39
TGFBR3-211ENST00000533370 ZNF197O14709 1029 aa12.64□□□□□ -0.39
TGFBR3-211ENST00000533370 MAP3K7O43318 606 aa12.64□□□□□ -0.39
TGFBR3-211ENST00000533370 ACSL4O60488 711 aa12.64□□□□□ -0.39
TGFBR3-211ENST00000533370 RFPL2O75678 378 aa12.64□□□□□ -0.39
TGFBR3-211ENST00000533370 PAPLNO95428 1278 aa12.64□□□□□ -0.39
TGFBR3-211ENST00000533370 LATS1O95835 1130 aa12.64□□□□□ -0.39
TGFBR3-211ENST00000533370 KRT14P02533 472 aa12.64□□□□□ -0.39
TGFBR3-211ENST00000533370 MBL2P11226 248 aaPredicted RBP12.64□□□□□ -0.39
TGFBR3-211ENST00000533370 ITIH2P19823 946 aa12.64□□□□□ -0.39
TGFBR3-211ENST00000533370 DDX6P26196 483 aaKnown RBP eCLIP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms