RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 CITED4Q96RK1 184 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 CGREF1Q99674 301 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 NMUR2Q9GZQ4 415 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 THAP2Q9H0W7 228 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 TPK1Q9H3S4 243 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 EPB41L1Q9H4G0 881 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 POLR1BQ9H9Y6 1135 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 LIN28AQ9H9Z2 209 aaKnown RBP6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 UGT1A7Q9HAW7 530 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 UGT1A10Q9HAW8 530 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 UGT1A8Q9HAW9 530 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 CLK4Q9HAZ1 481 aaKnown RBP6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 C12orf4Q9NQ89 552 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 TRPV5Q9NQA5 729 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 TRMT13Q9NUP7 481 aaKnown RBP6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 GNEQ9Y223 722 aaKnown RBP6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 STXBP5LQ9Y2K9 1186 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 RPTORQ8N122 1335 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 FAM237BA0A1B0GVD1 139 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 CENPXA8MT69 81 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 FOXO6A8MYZ6 492 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 EVPLLA8MZ36 301 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 TMEM114B3SHH9 223 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 K7EPI3 171 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 PSMD11O00231 422 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 EIF3FO00303 357 aaPredicted RBP6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 ZNF862O60290 1169 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 STAM2O75886 525 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 PARNO95453 639 aaKnown RBP6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 OAS1P00973 400 aaKnown RBP6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 TRIM49P0CI25 452 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 TRIM49CP0CI26 452 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 HOXD11P31277 338 aaPredicted RBP6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 SFNP31947 248 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 CPT1AP50416 773 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 NRF1Q16656 503 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 SMU1Q2TAY7 513 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 ZNF568Q3ZCX4 644 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 ANKDD1AQ495B1 522 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 DEPDC1Q5TB30 811 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 HAUS6Q7Z4H7 955 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 CDH24Q86UP0 819 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 PLD3Q8IV08 490 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 ADCY4Q8NFM4 1077 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 HASPINQ8TF76 798 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 ATG4AQ8WYN0 398 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 AGPAT1Q99943 283 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 C20orf96Q9NUD7 363 aaPredicted RBP6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 SORCS3Q9UPU3 1222 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 GON4LQ3T8J9 2241 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 SNPHO15079 494 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 PHGDHO43175 533 aaKnown RBP6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 ITM2AO43736 263 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 TPPPO94811 219 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 PRLP01236 227 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 CD58P19256 250 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 SLC1A1P43005 524 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 RXRGP48443 463 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 TRIM25Q14258 630 aaKnown RBP6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 NAALADL2Q58DX5 795 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 ATG14Q6ZNE5 492 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 SETD3Q86TU7 594 aaPredicted RBP6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 KBTBD2Q8IY47 623 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 GALNT6Q8NCL4 622 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 TMA16Q96EY4 203 aaKnown RBP6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 PAWRQ96IZ0 340 aaKnown RBP6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 RIT2Q99578 217 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 MSTO1Q9BUK6 570 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 FRMD8Q9BZ67 464 aaPredicted RBP6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 ZDHHC18Q9NUE0 388 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 IGSF9Q9P2J2 1179 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 SLC7A8Q9UHI5 535 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 AURKCQ9UQB9 309 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 MYH8P13535 1937 aa6.96□□□□□ -1.3
TGFBR3-209ENST00000532540 ZSCAN5BA6NJL1 495 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 PDZK1P1A8MUH7 402 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 FAM47E-STBD1D6RA91 191 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 RAD51BO15315 384 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 CYP26A1O43174 497 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 MYO1DO94832 1006 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 HMGCRP04035 888 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 NR3C1P04150 777 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 ENDOUP21128 410 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 S100A5P33763 92 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 GARSP41250 739 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 MFAP3P55082 362 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 WDR4P57081 412 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 DAB2P98082 770 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 CENPCQ03188 943 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 BTG3Q14201 252 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 SFT2D3Q587I9 215 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 PPM1LQ5SGD2 360 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 HGSNATQ68CP4 663 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 LRRC8EQ6NSJ5 796 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 GALNT18Q6P9A2 607 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 UTS2BQ765I0 119 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 FBXW8Q8N3Y1 598 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 EFHD2Q96C19 240 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 FAM193BQ96PV7 902 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 DCLK3Q9C098 648 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms