RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 PTPRDP23468 1912 aa11.41□□□□□ -0.58
CAPN1-221ENST00000531068 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-221ENST00000531068 BCLAF3A2AJT9 711 aaKnown RBP11.4□□□□□ -0.58
CAPN1-221ENST00000531068 TBL1XO60907 577 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 HSF2BPO75031 334 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 APOEP02649 317 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 ATP5BP06576 529 aaKnown RBP11.4□□□□□ -0.58
CAPN1-221ENST00000531068 TNNT1P13805 278 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 UCHL3P15374 230 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 GABRG2P18507 467 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 HOXD9P28356 352 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-221ENST00000531068 MPLP40238 635 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 ATXN1P54253 815 aaKnown RBP11.4□□□□□ -0.58
CAPN1-221ENST00000531068 JAM2P57087 298 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 CREB5Q02930 508 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 MTA1Q13330 715 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 ENPP2Q13822 863 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 AASDHQ4L235 1098 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-221ENST00000531068 DCAF6Q58WW2 860 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 PLA2G2CQ5R387 149 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 SYPL2Q5VXT5 272 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 SLC47A2Q86VL8 602 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 ZDHHC17Q8IUH5 632 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 HJURPQ8NCD3 748 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-221ENST00000531068 TMEM35BQ8NCS4 154 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 RLN3Q8WXF3 142 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 P2RY11Q96G91 374 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 SLC39A13Q96H72 371 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 FCRL2Q96LA5 508 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-221ENST00000531068 LSM14BQ9BX40 385 aaKnown RBP11.4□□□□□ -0.58
CAPN1-221ENST00000531068 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.4□□□□□ -0.58
CAPN1-221ENST00000531068 CACNA2D2Q9NY47 1150 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 DAAM1Q9Y4D1 1078 aa11.4□□□□□ -0.58
CAPN1-221ENST00000531068 GVINP1Q7Z2Y8 2422 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 WASH3PC4AMC7 463 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 ARHGAP6O43182 974 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 TRUB2O95900 331 aaKnown RBP11.39□□□□□ -0.59
CAPN1-221ENST00000531068 CYP11B1P15538 503 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 DHPSP49366 369 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-221ENST00000531068 MAP7D1Q3KQU3 841 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 FAM133BQ5BKY9 247 aaKnown RBP11.39□□□□□ -0.59
CAPN1-221ENST00000531068 OR6B2Q6IFH4 312 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 CYP2U1Q7Z449 544 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 METTL3Q86U44 580 aaKnown RBP11.39□□□□□ -0.59
CAPN1-221ENST00000531068 PASD1Q8IV76 773 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 CNGA4Q8IV77 575 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 AHI1Q8N157 1196 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.39□□□□□ -0.59
CAPN1-221ENST00000531068 ATP6V0D2Q8N8Y2 350 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 MSANTD4Q8NCY6 345 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 C1orf131Q8NDD1 294 aaKnown RBP11.39□□□□□ -0.59
CAPN1-221ENST00000531068 OR8K1Q8NGG5 319 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 DDX1Q92499 740 aaKnown RBP11.39□□□□□ -0.59
CAPN1-221ENST00000531068 SYN2Q92777 582 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-221ENST00000531068 RNF34Q969K3 372 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 BTN2A3PQ96KV6 586 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 CPXM1Q96SM3 734 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 FAM207AQ9NSI2 230 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-221ENST00000531068 ABHD10Q9NUJ1 306 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 RRN3Q9NYV6 651 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 TJP2Q9UDY2 1190 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 GGA2Q9UJY4 613 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 CLEC4EQ9ULY5 219 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 MYO6Q9UM54 1294 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 LUC7L2Q9Y383 392 aaKnown RBP11.39□□□□□ -0.59
CAPN1-221ENST00000531068 GREB1Q4ZG55 1949 aa11.39□□□□□ -0.59
CAPN1-221ENST00000531068 OTOGLQ3ZCN5 2332 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 KIF26AQ9ULI4 1882 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-221ENST00000531068 CFAP54Q96N23 3096 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 GOLGA6L7A0A1B0GV03 622 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 SLC30A4O14863 429 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 KHNYNO15037 678 aaKnown RBP11.38□□□□□ -0.59
CAPN1-221ENST00000531068 LSM8O95777 96 aaKnown RBP11.38□□□□□ -0.59
CAPN1-221ENST00000531068 DLDP09622 509 aaKnown RBP11.38□□□□□ -0.59
CAPN1-221ENST00000531068 PABPC1P11940 636 aaKnown RBP11.38□□□□□ -0.59
CAPN1-221ENST00000531068 POLR2EP19388 210 aaKnown RBP11.38□□□□□ -0.59
CAPN1-221ENST00000531068 NDUFV2P19404 249 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 ABCB4P21439 1286 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 BCKDHBP21953 392 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 HLA-FP30511 346 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 CCR1P32246 355 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 IL12RB1P42701 662 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 LIMK1P53667 647 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 SLC6A3Q01959 620 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 ZNF234Q14588 700 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 SF3A2Q15428 464 aaKnown RBP11.38□□□□□ -0.59
CAPN1-221ENST00000531068 ASTE1Q2TB18 679 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-221ENST00000531068 ZC3H12AQ5D1E8 599 aaKnown RBP11.38□□□□□ -0.59
CAPN1-221ENST00000531068 MS4A13Q5J8X5 152 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 HGSNATQ68CP4 663 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 RNF43Q68DV7 783 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 KIAA1211LQ6NV74 962 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 RFWD3Q6PCD5 774 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 SERPINA13PQ6UXR4 307 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 CHST9Q7L1S5 443 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 KIAA0907Q7Z7F0 614 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-221ENST00000531068 TAC4Q86UU9 113 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 MFN1Q8IWA4 741 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 DEFB106AQ8N104 65 aa11.38□□□□□ -0.59
CAPN1-221ENST00000531068 ZNF397Q8NF99 534 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms