RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 EPC2Q52LR7 807 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 GPR107Q5VW38 600 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 KAZNQ674X7 775 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 PPP1R18Q6NYC8 613 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 TMEM26Q6ZUK4 368 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 CATSPER3Q86XQ3 398 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 RHOT1Q8IXI2 618 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 SLC38A6Q8IZM9 456 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 SIX5Q8N196 739 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 ANKFN1Q8N957 763 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 AFG1LQ8WV93 481 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 SNX25Q9H3E2 840 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 HACD3Q9P035 362 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 TRMT112Q9UI30 125 aaKnown RBP8.34□□□□□ -1.07
CSDE1-214ENST00000530886 AGO2Q9UKV8 859 aaKnown RBP8.34□□□□□ -1.07
CSDE1-214ENST00000530886 PSME2Q9UL46 239 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 SEC14L2O76054 403 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 NTSR2O95665 410 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 FYNP06241 537 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 KRT5P13647 590 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 KLRK1P26718 216 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 IFNA8P32881 189 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 RFC1P35251 1148 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-214ENST00000530886 STAT3P40763 770 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 GPD2P43304 727 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 CDH15P55291 814 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 STX1BP61266 288 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 GNA12Q03113 381 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 KRT39Q6A163 491 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 BNC2Q6ZN30 1099 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-214ENST00000530886 MAVSQ7Z434 540 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 ARHGEF19Q8IW93 802 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 SNX31Q8N9S9 440 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 SNX18Q96RF0 628 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 ADAMTS10Q9H324 1103 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 XPNPEP1Q9NQW7 623 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 SLAIN2Q9P270 581 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 NXF1Q9UBU9 619 aaKnown RBP8.34□□□□□ -1.07
CSDE1-214ENST00000530886 KCNN3Q9UGI6 736 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 PCDHB13Q9Y5F0 798 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 DOCK5Q9H7D0 1870 aa8.34□□□□□ -1.08
CSDE1-214ENST00000530886 B8ZZF3 427 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 ARHGAP33O14559 1287 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 PROSCO94903 275 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 KRT18P05783 430 aaKnown RBP8.33□□□□□ -1.08
CSDE1-214ENST00000530886 PTPN1P18031 435 aaKnown RBP8.33□□□□□ -1.08
CSDE1-214ENST00000530886 PKLRP30613 574 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 IST1P53990 364 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 FNBP1LQ5T0N5 605 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 MBLAC2Q68D91 279 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 TRIM72Q6ZMU5 477 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 ATG14Q6ZNE5 492 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 ADAMTSL2Q86TH1 951 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 SLC26A11Q86WA9 606 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 ZC3H7AQ8IWR0 971 aaKnown RBP8.33□□□□□ -1.08
CSDE1-214ENST00000530886 PGAM4Q8N0Y7 254 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 SIMC1Q8NDZ2 872 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 FBXO36Q8NEA4 188 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 CAPSLQ8WWF8 208 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 KLHL32Q96NJ5 620 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 MECRQ9BV79 373 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 FRMD8P1Q9BZ68 369 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-214ENST00000530886 C8orf4Q9NR00 106 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 EIF3LQ9Y262 564 aaKnown RBP8.33□□□□□ -1.08
CSDE1-214ENST00000530886 TCAF1Q9Y4C2 921 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 TESMINQ9Y4I5 508 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 DYRK3O43781 588 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 RFPL1O75677 317 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 SGPL1O95470 568 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 ZNF182P17025 639 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-214ENST00000530886 XRCC1P18887 633 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-214ENST00000530886 POLR2CP19387 275 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-214ENST00000530886 TRAF2Q12933 501 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 COG2Q14746 738 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 HERC3Q15034 1050 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 MSS51Q4VC12 460 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 PPP6R3Q5H9R7 873 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-214ENST00000530886 SLC10A5Q5PT55 438 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 TEDDM1Q5T9Z0 273 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 PARP8Q8N3A8 854 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 BHLHE22Q8NFJ8 381 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-214ENST00000530886 TOR1AIP2Q8NFQ8 470 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 JDP2Q8WYK2 163 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 PIGBQ92521 554 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 MRRFQ96E11 262 aaKnown RBP8.33□□□□□ -1.08
CSDE1-214ENST00000530886 BTN2A3PQ96KV6 586 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 AIFM2Q9BRQ8 373 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 IFT122Q9HBG6 1241 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 CD320Q9NPF0 282 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 ANAPC7Q9UJX3 599 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 DNPEPQ9ULA0 475 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 MN1Q10571 1320 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-214ENST00000530886 ADAMTSL1Q8N6G6 1762 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 C1orf232A0A0U1RR37 186 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 TSPAN1O60635 241 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 GSRP00390 522 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 INHBAP08476 426 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 SNRPAP09012 282 aaKnown RBP8.33□□□□□ -1.08
CSDE1-214ENST00000530886 ME2P23368 584 aa8.33□□□□□ -1.08
CSDE1-214ENST00000530886 GRIK1P39086 918 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms