RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 CHST9Q7L1S5 443 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 RABEPKQ7Z6M1 372 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 TMEFF1Q8IYR6 380 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 CEP76Q8TAP6 659 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 WFDC5Q8TCV5 224 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 PRMT1Q99873 361 aaKnown RBP12.5□□□□□ -0.41
COPB1-206ENST00000529210 CIPCQ9C0C6 399 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 NUCKS1Q9H1E3 243 aaKnown RBP12.5□□□□□ -0.41
COPB1-206ENST00000529210 GANQ9H2C0 597 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 SMOC1Q9H4F8 434 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 PRDM16Q9HAZ2 1276 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 RRN3Q9NYV6 651 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 PLA2G4CQ9UP65 541 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 CEP83Q9Y592 693 aa12.5□□□□□ -0.41
COPB1-206ENST00000529210 CNOT1A5YKK6 2376 aaKnown RBP12.5□□□□□ -0.41
COPB1-206ENST00000529210 GON4LQ3T8J9 2241 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 DCDC2BA2VCK2 349 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 F8VZ95 297 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 SYNCRIPO60506 623 aaKnown RBP12.49□□□□□ -0.41
COPB1-206ENST00000529210 DAB1O75553 588 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 LSM8O95777 96 aaKnown RBP12.49□□□□□ -0.41
COPB1-206ENST00000529210 MBD3O95983 291 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 ASLP04424 464 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 ERBB2P04626 1255 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 PRKCHP24723 683 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 OXTRP30559 389 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 CCR1P32246 355 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 CD70P32970 193 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 NOS2P35228 1153 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 PITX1P78337 314 aaPredicted RBP12.49□□□□□ -0.41
COPB1-206ENST00000529210 CDK17Q00537 523 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 SLC6A3Q01959 620 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 RPL6Q02878 288 aaKnown RBP12.49□□□□□ -0.41
COPB1-206ENST00000529210 ZNF33AQ06730 810 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 LMAN2Q12907 356 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 SLC12A1Q13621 1099 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 KRT31Q15323 416 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 TAF5Q15542 800 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 HSP90AA4PQ58FG1 418 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 DCAF6Q58WW2 860 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 TTC39BQ5VTQ0 682 aaPredicted RBP12.49□□□□□ -0.41
COPB1-206ENST00000529210 MBLAC2Q68D91 279 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 TCEAL6Q6IPX3 200 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 SERPINA13PQ6UXR4 307 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 FAM183BPQ6ZVS7 135 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 ARCQ7LC44 396 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 ZNF677Q86XU0 584 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 TMPRSS6Q8IU80 811 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 MFN1Q8IWA4 741 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 DEFB106AQ8N104 65 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 ATP6V0D2Q8N8Y2 350 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 TMEM35BQ8NCS4 154 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 OR2T3Q8NH03 318 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 ADAM32Q8TC27 787 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 FOXJ1Q92949 421 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 TCEAL3Q969E4 200 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 NT5C3BQ969T7 300 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 MYEOVQ96EZ4 313 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 PGAP3Q96FM1 320 aaPredicted RBP12.49□□□□□ -0.41
COPB1-206ENST00000529210 MYO19Q96H55 970 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 EDEM2Q9BV94 578 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 LSM14BQ9BX40 385 aaKnown RBP12.49□□□□□ -0.41
COPB1-206ENST00000529210 TMEM74BQ9NUR3 256 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 ANO10Q9NW15 660 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 WSB2Q9NYS7 404 aaPredicted RBP12.49□□□□□ -0.41
COPB1-206ENST00000529210 SLC12A6Q9UHW9 1150 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 INTS6Q9UL03 887 aaKnown RBP12.49□□□□□ -0.41
COPB1-206ENST00000529210 CACNA1EQ15878 2313 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 PCDH15Q96QU1 1955 aa12.49□□□□□ -0.41
COPB1-206ENST00000529210 SPTBN2O15020 2390 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 ITIH6Q6UXX5 1313 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 CDX4O14627 284 aaPredicted RBP12.48□□□□□ -0.41
COPB1-206ENST00000529210 LUC7L3O95232 432 aaKnown RBP12.48□□□□□ -0.41
COPB1-206ENST00000529210 EPHX1P07099 455 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 ADRB1P08588 477 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 PNMA6AP0CW24 399 aaPredicted RBP12.48□□□□□ -0.41
COPB1-206ENST00000529210 TACR2P21452 398 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 CD6P30203 668 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 MATKP42679 507 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 VASPP50552 380 aaPredicted RBP12.48□□□□□ -0.41
COPB1-206ENST00000529210 RPS24P62847 133 aaKnown RBP12.48□□□□□ -0.41
COPB1-206ENST00000529210 ARID5AQ03989 594 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 ZBTB16Q05516 673 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 RAPGEF1Q13905 1077 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 DUOXA1Q1HG43 343 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 C5orf22Q49AR2 442 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 ZC3H12AQ5D1E8 599 aaKnown RBP12.48□□□□□ -0.41
COPB1-206ENST00000529210 IL31Q6EBC2 164 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 PASD1Q8IV76 773 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 SLC41A1Q8IVJ1 513 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 CADM4Q8NFZ8 388 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 EPS8L1Q8TE68 723 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 SORCS1Q8WY21 1168 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 DNASE2BQ8WZ79 361 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 PIGKQ92643 395 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 PRCCQ92733 491 aaPredicted RBP12.48□□□□□ -0.41
COPB1-206ENST00000529210 SIPA1Q96FS4 1042 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 PCED1AQ9H1Q7 454 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 CAPN10Q9HC96 672 aa12.48□□□□□ -0.41
COPB1-206ENST00000529210 SUN2Q9UH99 717 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms