RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 E9PAM4 449 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 ARL4AP40617 200 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 CCDC181Q5TID7 509 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 RFX6Q8HWS3 928 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 BBS7Q8IWZ6 715 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 ZNF683Q8IZ20 524 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 IGSF8Q969P0 613 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 RSPRY1Q96DX4 576 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 RIPOR3Q96MK2 946 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 ASB16Q96NS5 453 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 MYADMQ96S97 322 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 MPP6Q9NZW5 540 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 CD207Q9UJ71 328 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 TTC7AQ9ULT0 858 aaPredicted RBP25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 SH3BP1Q9Y3L3 701 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 CST8O60676 142 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 SP100P23497 879 aaPredicted RBP25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 EPHB2P29323 1055 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 VCPP55072 806 aaKnown RBP25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 TPI1P60174 286 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 KLF1Q13351 362 aaPredicted RBP25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 PPP2R5EQ16537 467 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 ADGRF1Q5T601 910 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 MANEALQ5VSG8 457 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 RWDD4Q6NW29 188 aaKnown RBP25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 HTR3DQ70Z44 454 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 CHSY1Q86X52 802 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 FAF2Q96CS3 445 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 FAM118BQ9BPY3 351 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 MAK16Q9BXY0 300 aaKnown RBP25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 L2HGDHQ9H9P8 463 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 ARHGEF4Q9NR80 690 aa25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 USP15Q9Y4E8 981 aaPredicted RBP25.53■■□□□ 1.68
LDLRAD3-203ENST00000528989 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.52■■□□□ 1.68
LDLRAD3-203ENST00000528989 PGRMC1O00264 195 aaKnown RBP25.52■■□□□ 1.68
LDLRAD3-203ENST00000528989 DPYSQ14117 519 aa25.52■■□□□ 1.68
LDLRAD3-203ENST00000528989 NETO2Q8NC67 525 aa25.52■■□□□ 1.68
LDLRAD3-203ENST00000528989 EPAS1Q99814 870 aa25.52■■□□□ 1.68
LDLRAD3-203ENST00000528989 UBE2ZQ9H832 354 aaPredicted RBP25.52■■□□□ 1.68
LDLRAD3-203ENST00000528989 GDE1Q9NZC3 331 aa25.52■■□□□ 1.68
LDLRAD3-203ENST00000528989 CDH7Q9ULB5 785 aa25.52■■□□□ 1.68
LDLRAD3-203ENST00000528989 TACR2P21452 398 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 PTPN7P35236 360 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 SGSHP51688 502 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 CIR1Q86X95 450 aaPredicted RBP25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 CFAP52Q8N1V2 620 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 AZIN2Q96A70 460 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 HAUS1Q96CS2 278 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 P2RY11Q96G91 374 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 ZMYM5Q9UJ78 669 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 R3HDM2Q9Y2K5 976 aaKnown RBP25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 H3BRJ5 948 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 DAPK3O43293 454 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 TSPAN3O60637 253 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 CETN2P41208 172 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 SIX1Q15475 284 aaPredicted RBP25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 ZNF77Q15935 545 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 LGI2Q8N0V4 545 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 SUSD6Q92537 303 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 SMARCD2Q92925 531 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 LINC00597Q9H2U6 94 aa25.51■■□□□ 1.67
LDLRAD3-203ENST00000528989 GRXCR2A6NFK2 248 aa25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 CNTN5O94779 1100 aa25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 MAP3K6O95382 1288 aa25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 ERCC2P18074 760 aa25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 GBP2P32456 591 aaPredicted RBP25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 MTHFRP42898 656 aa25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 PAFAH1B1P43034 410 aa25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 KCTD19Q17RG1 926 aaPredicted RBP25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 WHAMMP3Q1A5X7 153 aa25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 ALFQ53S48 1182 aa25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 NPNTQ6UXI9 565 aa25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 PLD5Q8N7P1 536 aa25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 LRRN4CLQ8ND94 238 aa25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 RPRD1AQ96P16 312 aaPredicted RBP25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 DCLK3Q9C098 648 aa25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 RCOR3Q9P2K3 495 aaPredicted RBP25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 STOML2Q9UJZ1 356 aa25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 LSM7Q9UK45 103 aaKnown RBP25.5■■□□□ 1.67
LDLRAD3-203ENST00000528989 TJP3O95049 919 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 HCAR3P49019 387 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 RPS24P62847 133 aaKnown RBP25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 NRG1Q02297 640 aaPredicted RBP25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 TUBB2AQ13885 445 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 VSIG1Q86XK7 387 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 CCDC33Q8N5R6 958 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 PRICKLE1Q96MT3 831 aaPredicted RBP25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 TUBB2BQ9BVA1 445 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 CARD6Q9BX69 1037 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 NDFIP2Q9NV92 336 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 EFR3BQ9Y2G0 817 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 E2F8A0AVK6 867 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 SLC9A4Q6AI14 798 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 TANGO2Q6ICL3 276 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 C1orf228Q6PIY5 440 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 TP53INP2Q8IXH6 220 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 CELF5Q8N6W0 485 aaKnown RBP25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 ATG4AQ8WYN0 398 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 BHMTQ93088 406 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms