RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 C18orf8Q96DM3 657 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 FCRL2Q96LA5 508 aaPredicted RBP9.96□□□□□ -0.82
CHD7-208ENST00000528280 MRGPRX1Q96LB2 322 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 ACOX2Q99424 681 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 NUSAP1Q9BXS6 441 aaKnown RBP9.96□□□□□ -0.82
CHD7-208ENST00000528280 ITM2CQ9NQX7 267 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 CACNA2D2Q9NY47 1150 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 KIAA1522Q9P206 1035 aaPredicted RBP9.96□□□□□ -0.82
CHD7-208ENST00000528280 EVLQ9UI08 416 aaPredicted RBP9.96□□□□□ -0.82
CHD7-208ENST00000528280 GGA2Q9UJY4 613 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 HCN2Q9UL51 889 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 ANTXRLA6NF34 631 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 KCNU1A8MYU2 1149 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 WASH3PC4AMC7 463 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 H0Y626 953 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 EPHX1P07099 455 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 DLDP09622 509 aaKnown RBP9.95□□□□□ -0.82
CHD7-208ENST00000528280 CCDC172P0C7W6 258 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 PABPC1P11940 636 aaKnown RBP9.95□□□□□ -0.82
CHD7-208ENST00000528280 CYP11B1P15538 503 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 NDUFV2P19404 249 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 HLA-FP30511 346 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 CDH5P33151 784 aaPredicted RBP9.95□□□□□ -0.82
CHD7-208ENST00000528280 NNMTP40261 264 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 GABRB2P47870 512 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 MYL5Q02045 173 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 RPL6Q02878 288 aaKnown RBP9.95□□□□□ -0.82
CHD7-208ENST00000528280 ZBTB16Q05516 673 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 DUOXA1Q1HG43 343 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 FNDC3BQ53EP0 1204 aaKnown RBP9.95□□□□□ -0.82
CHD7-208ENST00000528280 HSP90AA4PQ58FG1 418 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 FAM133BQ5BKY9 247 aaKnown RBP9.95□□□□□ -0.82
CHD7-208ENST00000528280 MS4A13Q5J8X5 152 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 WDR45BQ5MNZ6 344 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 RABGAP1LQ5R372 815 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 CDKAL1Q5VV42 579 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 DAB2IPQ5VWQ8 1189 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 LYSMD4Q5XG99 296 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 RNF43Q68DV7 783 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 CHST9Q7L1S5 443 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 SLC26A9Q7LBE3 791 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 ERICH1Q86X53 443 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 TMPRSS6Q8IU80 811 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 MFN1Q8IWA4 741 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 TMEFF1Q8IYR6 380 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 DEFB106AQ8N104 65 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 ZNF397Q8NF99 534 aaPredicted RBP9.95□□□□□ -0.82
CHD7-208ENST00000528280 CADM4Q8NFZ8 388 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 RLN3Q8WXF3 142 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 PIGKQ92643 395 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 TTC17Q96AE7 1141 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 SIPA1Q96FS4 1042 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 SLC2A13Q96QE2 648 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 CPXM1Q96SM3 734 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 NUP58Q9BVL2 599 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 NAA15Q9BXJ9 866 aaKnown RBP9.95□□□□□ -0.82
CHD7-208ENST00000528280 PCED1AQ9H1Q7 454 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 VPS16Q9H269 839 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 FAM204AQ9H8W3 233 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 CD248Q9HCU0 757 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 ZDHHC4Q9NPG8 344 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 ACP6Q9NPH0 428 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 ABCB8Q9NUT2 735 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 FANCLQ9NW38 375 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 CALCOCO1Q9P1Z2 691 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 CYTH4Q9UIA0 394 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 STAP1Q9ULZ2 295 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 SCML1Q9UN30 329 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 KIAA1549LQ6ZVL6 1849 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 SPAG17Q6Q759 2223 aa9.95□□□□□ -0.82
CHD7-208ENST00000528280 IGHV1OR15-9A0A0B4J2B8 117 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 GOLGA6L7A0A1B0GV03 622 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 SMTNL1A8MU46 457 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 F5H5T6 163 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 RNASEH1O60930 286 aaKnown RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 IGLV3-25P01717 112 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 SRPRAP08240 638 aaKnown RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 C7P10643 843 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 GNSP15586 552 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 BCKDHBP21953 392 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 CD6P30203 668 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 SLC6A4P31645 630 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 MATKP42679 507 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 IL12RB1P42701 662 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 APBA1Q02410 837 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 SULT2A1Q06520 285 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 ZNF33AQ06730 810 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 EIF4EBP2Q13542 120 aaPredicted RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 CAMK2GQ13555 558 aaPredicted RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 CDH18Q13634 790 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 KRT31Q15323 416 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 SF3A2Q15428 464 aaKnown RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 FUT11Q495W5 492 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 ZC3H12AQ5D1E8 599 aaKnown RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 N4BP2L1Q5TBK1 243 aaPredicted RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 STPG1Q5TH74 334 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 MBLAC2Q68D91 279 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 KIAA1211LQ6NV74 962 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 DPY19L2P1Q6NXN4 242 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms