RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 RPS24P62847 133 aaKnown RBP27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 NME3Q13232 169 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 ZNF234Q14588 700 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 STARD3Q14849 445 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 FAM102AQ5T9C2 384 aaPredicted RBP27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 RAP1GAP2Q684P5 730 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 CHST9Q7L1S5 443 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 ADIPOR2Q86V24 386 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 CHSY1Q86X52 802 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 MFN1Q8IWA4 741 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 CCDC117Q8IWD4 279 aaPredicted RBP27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 LGI2Q8N0V4 545 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 SPACA7Q96KW9 195 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 NPY6RQ99463 290 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 TMEM51Q9NW97 253 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 STAP1Q9ULZ2 295 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 RAD54BQ9Y620 910 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 M0QYT0 321 aa27.29■■□□□ 1.96
TSPAN4-217ENST00000527644 WFDC5Q8TCV5 224 aa27.29■■□□□ 1.96
TSPAN4-217ENST00000527644 RLN3Q8WXF3 142 aa27.29■■□□□ 1.96
TSPAN4-217ENST00000527644 SORCS1Q8WY21 1168 aa27.29■■□□□ 1.96
TSPAN4-217ENST00000527644 NT5C3BQ969T7 300 aa27.29■■□□□ 1.96
TSPAN4-217ENST00000527644 PLA2G4CQ9UP65 541 aa27.29■■□□□ 1.96
TSPAN4-217ENST00000527644 PCDHGA5Q9Y5G8 931 aa27.29■■□□□ 1.96
TSPAN4-217ENST00000527644 F5H5T6 163 aa27.28■■□□□ 1.96
TSPAN4-217ENST00000527644 CD70P32970 193 aa27.28■■□□□ 1.96
TSPAN4-217ENST00000527644 CSRP2Q16527 193 aa27.28■■□□□ 1.96
TSPAN4-217ENST00000527644 MAP7D1Q3KQU3 841 aa27.28■■□□□ 1.96
TSPAN4-217ENST00000527644 C2CD6Q53TS8 623 aa27.28■■□□□ 1.96
TSPAN4-217ENST00000527644 CFAP52Q8N1V2 620 aa27.28■■□□□ 1.96
TSPAN4-217ENST00000527644 CARNMT1Q8N4J0 409 aa27.28■■□□□ 1.96
TSPAN4-217ENST00000527644 LMLNQ96KR4 655 aa27.28■■□□□ 1.96
TSPAN4-217ENST00000527644 PRMT1Q99873 361 aaKnown RBP27.28■■□□□ 1.96
TSPAN4-217ENST00000527644 ARRDC1-AS1Q9H2J1 176 aa27.28■■□□□ 1.96
TSPAN4-217ENST00000527644 SEMA4GQ9NTN9 838 aa27.28■■□□□ 1.96
TSPAN4-217ENST00000527644 CALCOCO1Q9P1Z2 691 aa27.28■■□□□ 1.96
TSPAN4-217ENST00000527644 FAM170AA1A519 330 aa27.27■■□□□ 1.96
TSPAN4-217ENST00000527644 F9P00740 461 aa27.27■■□□□ 1.96
TSPAN4-217ENST00000527644 ATP5BP06576 529 aaKnown RBP27.27■■□□□ 1.96
TSPAN4-217ENST00000527644 CCDC172P0C7W6 258 aa27.27■■□□□ 1.96
TSPAN4-217ENST00000527644 NDUFV2P19404 249 aa27.27■■□□□ 1.96
TSPAN4-217ENST00000527644 BCKDHBP21953 392 aa27.27■■□□□ 1.96
TSPAN4-217ENST00000527644 MMP8P22894 467 aa27.27■■□□□ 1.96
TSPAN4-217ENST00000527644 CDH18Q13634 790 aa27.27■■□□□ 1.96
TSPAN4-217ENST00000527644 PMS2CLQ68D20 193 aa27.27■■□□□ 1.96
TSPAN4-217ENST00000527644 MBLAC2Q68D91 279 aa27.27■■□□□ 1.96
TSPAN4-217ENST00000527644 ARCQ7LC44 396 aa27.27■■□□□ 1.96
TSPAN4-217ENST00000527644 PGAP3Q96FM1 320 aaPredicted RBP27.27■■□□□ 1.96
TSPAN4-217ENST00000527644 TMEM59LQ9UK28 342 aa27.27■■□□□ 1.96
TSPAN4-217ENST00000527644 GOLGA8SH3BPF8 625 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 SYNCRIPO60506 623 aaKnown RBP27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 FOXD2O60548 495 aaPredicted RBP27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 ZNF217O75362 1048 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 LUC7L3O95232 432 aaKnown RBP27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 CAVIN2O95810 425 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 UNGP13051 313 aaPredicted RBP27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 POLR2EP19388 210 aaKnown RBP27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 SULT1E1P49888 294 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 LMNB2Q03252 620 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 SKOR2Q2VWA4 1001 aaPredicted RBP27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 SLC25A52Q3SY17 297 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 OTUD1Q5VV17 481 aaPredicted RBP27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 SERPINA13PQ6UXR4 307 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 MMS22LQ6ZRQ5 1243 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 SND1Q7KZF4 910 aaKnown RBP eCLIP27.26■■□□□ 1.958e-7■■□□□ 12.1
TSPAN4-217ENST00000527644 ERLEC1Q96DZ1 483 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 MRGPRX1Q96LB2 322 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 WDCPQ9H6R7 721 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 CBX8Q9HC52 389 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 PIGVQ9NUD9 493 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 MYO6Q9UM54 1294 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 ABCA7Q8IZY2 2146 aa27.26■■□□□ 1.95
TSPAN4-217ENST00000527644 A0A1B0GTH6 734 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 A0A1W2PQC6 194 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 MAP3K13O43283 966 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 DLDP09622 509 aaKnown RBP27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 FERP16591 822 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 CXCR3P49682 368 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 TPM4P67936 248 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 LMAN2Q12907 356 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 FUT11Q495W5 492 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 BRMS1LQ5PSV4 323 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 RABGAP1LQ5R372 815 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 TTC39BQ5VTQ0 682 aaPredicted RBP27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 CYB5D2Q8WUJ1 264 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 PCDHB18PQ96TA0 734 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 ADAM33Q9BZ11 813 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 PAXBP1Q9Y5B6 917 aa27.25■■□□□ 1.95
TSPAN4-217ENST00000527644 RALGAPA1Q6GYQ0 2036 aa27.24■■□□□ 1.95
TSPAN4-217ENST00000527644 CEP250Q9BV73 2442 aa27.24■■□□□ 1.95
TSPAN4-217ENST00000527644 PRR5-ARHGAP8B1AHC4 643 aa27.24■■□□□ 1.95
TSPAN4-217ENST00000527644 H0Y626 953 aa27.24■■□□□ 1.95
TSPAN4-217ENST00000527644 EPHX1P07099 455 aa27.24■■□□□ 1.95
TSPAN4-217ENST00000527644 TFE3P19532 575 aaPredicted RBP27.24■■□□□ 1.95
TSPAN4-217ENST00000527644 PRKCHP24723 683 aa27.24■■□□□ 1.95
TSPAN4-217ENST00000527644 FLT3P36888 993 aa27.24■■□□□ 1.95
TSPAN4-217ENST00000527644 NSFP46459 744 aaKnown RBP27.24■■□□□ 1.95
TSPAN4-217ENST00000527644 ARHGAP8P85298 464 aa27.24■■□□□ 1.95
TSPAN4-217ENST00000527644 DEUP1Q05D60 604 aa27.24■■□□□ 1.95
TSPAN4-217ENST00000527644 FNDC3BQ53EP0 1204 aaKnown RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms