RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	PTPRK	Q15262	1439 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CROCC2	H7BZ55	1655 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ADGB	Q8N7X0	1667 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	MED14	O60244	1454 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299		A0A1W2PRQ8	180 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	GMNC	A6NCL1	334 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	TRIM64	A6NGJ6	449 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	TRIM64B	A6NI03	449 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	OR5K4	A6NMS3	321 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PRR5-ARHGAP8	B1AHC4	643 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CENPBD1	B2RD01	187 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	RASA4B	C9J798	803 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299		E7EVH7	732 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	HIP1	O00291	1037 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	FBP2	O00757	339 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ENPP3	O14638	875 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	IFIT3	O14879	490 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	RASA4	O43374	803 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	FIBP	O43427	364 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SULT1B1	O43704	296 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	STX6	O43752	255 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	TSPAN9	O75954	239 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	FOS	P01100	380 aa	Predicted RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	KRT6A	P02538	564 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	KRT6B	P04259	564 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	GNAI2	P04899	355 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	HLA-DOA	P06340	250 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PABPC4L	P0CB38	370 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	MYBL1	P10243	752 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	DDX5	P17844	614 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CFL1	P23528	166 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	TBXAS1	P24557	533 aa	Predicted RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PTX3	P26022	381 aa	Predicted RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PRKAR1B	P31321	381 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	RGS2	P41220	211 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ABCG1	P45844	678 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CBX5	P45973	191 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	HAAO	P46952	286 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PTDSS1	P48651	473 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CACNA2D1	P54289	1103 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	TBX4	P57082	545 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	KIF23	Q02241	960 aa	Predicted RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CDK18	Q07002	472 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CD69	Q07108	199 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	DNAJC3	Q13217	504 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	GNA13	Q14344	377 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	HLTF	Q14527	1009 aa	Known RBP eCLIP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ITIH4	Q14624	930 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	KPNB1	Q14974	876 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CDON	Q4KMG0	1287 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	LIN52	Q52LA3	116 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CYP4A22	Q5TCH4	519 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	METTL11B	Q5VVY1	283 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	TSHZ3	Q63HK5	1081 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	LMBRD2	Q68DH5	695 aa	Predicted RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SNRNP48	Q6IEG0	339 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	KIAA1841	Q6NSI8	718 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	C8orf74	Q6P047	294 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	NEK5	Q6P3R8	708 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ZNF449	Q6P9G9	518 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	UNQ6494/PRO21346	Q6UXR6	183 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SLC30A10	Q6XR72	485 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	DSTYK	Q6XUX3	929 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ZNF600	Q6ZNG1	722 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	RASGRP2	Q7LDG7	609 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	FGD2	Q7Z6J4	655 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	MRPL10	Q7Z7H8	261 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PATL1	Q86TB9	770 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CCDC83	Q8IWF9	413 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	DHX40	Q8IX18	779 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	HACE1	Q8IYU2	909 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ZBED8	Q8IZ13	594 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	NUP93	Q8N1F7	819 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ZNF366	Q8N895	744 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ENDOV	Q8N8Q3	282 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	BBOF1	Q8ND07	529 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PPFIBP2	Q8ND30	876 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ZNF384	Q8TF68	577 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	AEN	Q8WTP8	325 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	RSAD2	Q8WXG1	361 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	RIN2	Q8WYP3	895 aa	Predicted RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CCDC127	Q96BQ5	260 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	TMA16	Q96EY4	203 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PAWR	Q96IZ0	340 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	HIST1H2AH	Q96KK5	128 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	IFT74	Q96LB3	600 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CEP19	Q96LK0	163 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CIB1	Q99828	191 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	HIST1H2AJ	Q99878	128 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SELENOO	Q9BVL4	669 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SPZ1	Q9BXG8	430 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	AGXT2	Q9BYV1	514 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CRNKL1	Q9BZJ0	848 aa	Known RBP	3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SHCBP1L	Q9BZQ2	653 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CCSER1	Q9C0I3	900 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	PCIF1	Q9H4Z3	704 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	SCPEP1	Q9HB40	452 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	CNGB3	Q9NQW8	809 aa		3.88	□□□□□ -1.79
CLNS1A-209	ENST00000527299	ETNK2	Q9NVF9	386 aa		3.88	□□□□□ -1.79

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