RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ENGASEQ8NFI3 743 aa26.99■■□□□ 1.91
PVT1-219ENST00000523427 SGK2Q9HBY8 427 aa26.99■■□□□ 1.91
PVT1-219ENST00000523427 SUN2Q9UH99 717 aa26.99■■□□□ 1.91
PVT1-219ENST00000523427 HPSEQ9Y251 543 aa26.99■■□□□ 1.91
PVT1-219ENST00000523427 TMEM131Q92545 1883 aa26.99■■□□□ 1.91
PVT1-219ENST00000523427 CTSKP43235 329 aa26.98■■□□□ 1.91
PVT1-219ENST00000523427 ZNF445P59923 1031 aa26.98■■□□□ 1.91
PVT1-219ENST00000523427 ZBTB16Q05516 673 aa26.98■■□□□ 1.91
PVT1-219ENST00000523427 BST2Q10589 180 aaKnown RBP26.98■■□□□ 1.91
PVT1-219ENST00000523427 DPYDQ12882 1025 aa26.98■■□□□ 1.91
PVT1-219ENST00000523427 DCAF17Q5H9S7 520 aaPredicted RBP26.98■■□□□ 1.91
PVT1-219ENST00000523427 SMYD4Q8IYR2 804 aaPredicted RBP26.98■■□□□ 1.91
PVT1-219ENST00000523427 SLC6A18Q96N87 628 aa26.98■■□□□ 1.91
PVT1-219ENST00000523427 OSGEPQ9NPF4 335 aa26.98■■□□□ 1.91
PVT1-219ENST00000523427 SCUBE2Q9NQ36 999 aa26.98■■□□□ 1.91
PVT1-219ENST00000523427 ABCC13Q9NSE7 274 aa26.98■■□□□ 1.91
PVT1-219ENST00000523427 FBXL12Q9NXK8 326 aa26.98■■□□□ 1.91
PVT1-219ENST00000523427 LOC400499M0QZD8 3231 aa26.97■■□□□ 1.91
PVT1-219ENST00000523427 PCDHGA12O60330 932 aa26.97■■□□□ 1.91
PVT1-219ENST00000523427 EPB41P11171 864 aaKnown RBP26.97■■□□□ 1.91
PVT1-219ENST00000523427 RGS7P49802 495 aa26.97■■□□□ 1.91
PVT1-219ENST00000523427 CLDN6P56747 220 aa26.97■■□□□ 1.91
PVT1-219ENST00000523427 ENPEPQ07075 957 aa26.97■■□□□ 1.91
PVT1-219ENST00000523427 LRMPQ12912 555 aa26.97■■□□□ 1.91
PVT1-219ENST00000523427 CAMK2BQ13554 666 aa26.97■■□□□ 1.91
PVT1-219ENST00000523427 KIAA0895LQ68EN5 471 aa26.97■■□□□ 1.91
PVT1-219ENST00000523427 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.97■■□□□ 1.91
PVT1-219ENST00000523427 PDCD7Q8N8D1 485 aaKnown RBP26.97■■□□□ 1.91
PVT1-219ENST00000523427 SPATA32Q96LK8 384 aa26.97■■□□□ 1.91
PVT1-219ENST00000523427 ACE2Q9BYF1 805 aaPredicted RBP26.97■■□□□ 1.91
PVT1-219ENST00000523427 FBRSQ9HAH7 460 aa26.97■■□□□ 1.91
PVT1-219ENST00000523427 DKK4Q9UBT3 224 aa26.97■■□□□ 1.91
PVT1-219ENST00000523427 STOML2Q9UJZ1 356 aa26.97■■□□□ 1.91
PVT1-219ENST00000523427 CBX4O00257 560 aa26.96■■□□□ 1.91
PVT1-219ENST00000523427 STX10O60499 249 aa26.96■■□□□ 1.91
PVT1-219ENST00000523427 IGHV4-34P06331 123 aa26.96■■□□□ 1.91
PVT1-219ENST00000523427 INAVAQ3KP66 663 aa26.96■■□□□ 1.91
PVT1-219ENST00000523427 CBWD6Q4V339 395 aa26.96■■□□□ 1.91
PVT1-219ENST00000523427 CBWD3Q5JTY5 395 aa26.96■■□□□ 1.91
PVT1-219ENST00000523427 CBWD5Q5RIA9 395 aa26.96■■□□□ 1.91
PVT1-219ENST00000523427 KIAA0907Q7Z7F0 614 aaPredicted RBP26.96■■□□□ 1.91
PVT1-219ENST00000523427 DHX40Q8IX18 779 aaKnown RBP26.96■■□□□ 1.91
PVT1-219ENST00000523427 GOLGA1Q92805 767 aa26.96■■□□□ 1.91
PVT1-219ENST00000523427 SNX21Q969T3 373 aa26.96■■□□□ 1.91
PVT1-219ENST00000523427 FAXDC2Q96IV6 333 aa26.96■■□□□ 1.91
PVT1-219ENST00000523427 ORAI3Q9BRQ5 295 aa26.96■■□□□ 1.91
PVT1-219ENST00000523427 GCN1Q92616 2671 aaKnown RBP26.95■■□□□ 1.91
PVT1-219ENST00000523427 PLK4O00444 970 aa26.95■■□□□ 1.9
PVT1-219ENST00000523427 CETN3O15182 167 aa26.95■■□□□ 1.9
PVT1-219ENST00000523427 SLC6A4P31645 630 aa26.95■■□□□ 1.9
PVT1-219ENST00000523427 ST8SIA6P61647 398 aa26.95■■□□□ 1.9
PVT1-219ENST00000523427 CUL2Q13617 745 aa26.95■■□□□ 1.9
PVT1-219ENST00000523427 SMAD1Q15797 465 aaKnown RBP26.95■■□□□ 1.9
PVT1-219ENST00000523427 ZCWPW2Q504Y3 356 aa26.95■■□□□ 1.9
PVT1-219ENST00000523427 PIK3R6Q5UE93 754 aa26.95■■□□□ 1.9
PVT1-219ENST00000523427 MFN1Q8IWA4 741 aa26.95■■□□□ 1.9
PVT1-219ENST00000523427 PABPC3Q9H361 631 aaKnown RBP26.95■■□□□ 1.9
PVT1-219ENST00000523427 SERGEFQ9UGK8 458 aa26.95■■□□□ 1.9
PVT1-219ENST00000523427 A0A1W2PP55 124 aa26.94■■□□□ 1.9
PVT1-219ENST00000523427 SIN3BO75182 1162 aa26.94■■□□□ 1.9
PVT1-219ENST00000523427 LATS1O95835 1130 aa26.94■■□□□ 1.9
PVT1-219ENST00000523427 SLC11A2P49281 568 aa26.94■■□□□ 1.9
PVT1-219ENST00000523427 DAOAP59103 153 aa26.94■■□□□ 1.9
PVT1-219ENST00000523427 NCEH1Q6PIU2 408 aa26.94■■□□□ 1.9
PVT1-219ENST00000523427 CARNMT1Q8N4J0 409 aa26.94■■□□□ 1.9
PVT1-219ENST00000523427 AASDHPPTQ9NRN7 309 aa26.94■■□□□ 1.9
PVT1-219ENST00000523427 KNTC1P50748 2209 aa26.93■■□□□ 1.9
PVT1-219ENST00000523427 A0A1B0GTQ1 180 aa26.93■■□□□ 1.9
PVT1-219ENST00000523427 MID1O15344 667 aa26.93■■□□□ 1.9
PVT1-219ENST00000523427 RNASEH1O60930 286 aaKnown RBP26.93■■□□□ 1.9
PVT1-219ENST00000523427 JUPP14923 745 aa26.93■■□□□ 1.9
PVT1-219ENST00000523427 GALCP54803 685 aa26.93■■□□□ 1.9
PVT1-219ENST00000523427 RACK1P63244 317 aaKnown RBP26.93■■□□□ 1.9
PVT1-219ENST00000523427 KRBA2Q6ZNG9 492 aa26.93■■□□□ 1.9
PVT1-219ENST00000523427 PIP4K2CQ8TBX8 421 aa26.93■■□□□ 1.9
PVT1-219ENST00000523427 RSPH9Q9H1X1 276 aaPredicted RBP26.93■■□□□ 1.9
PVT1-219ENST00000523427 NEUROG2Q9H2A3 272 aa26.93■■□□□ 1.9
PVT1-219ENST00000523427 CNGB3Q9NQW8 809 aa26.93■■□□□ 1.9
PVT1-219ENST00000523427 A0A1W2PPC4 97 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 O00370 1275 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 VILLO15195 856 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 ACSL4O60488 711 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 RNASEH2AO75792 299 aaKnown RBP26.92■■□□□ 1.9
PVT1-219ENST00000523427 ITGAVP06756 1048 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 VDRP11473 427 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 ABCB4P21439 1286 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 CSKP41240 450 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 TBX4P57082 545 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 DNAJC3Q13217 504 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 EDRF1Q3B7T1 1238 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 FAM133BQ5BKY9 247 aaKnown RBP26.92■■□□□ 1.9
PVT1-219ENST00000523427 MMS22LQ6ZRQ5 1243 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 MMAAQ8IVH4 418 aaKnown RBP26.92■■□□□ 1.9
PVT1-219ENST00000523427 UNC45BQ8IWX7 931 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 KCTD13Q8WZ19 329 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 OMDQ99983 421 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 EBF2Q9HAK2 575 aa26.92■■□□□ 1.9
PVT1-219ENST00000523427 MUC22E2RYF6 1773 aaPredicted RBP26.92■■□□□ 1.9
PVT1-219ENST00000523427 ENC1O14682 589 aa26.91■■□□□ 1.9
PVT1-219ENST00000523427 ZIC2O95409 532 aaPredicted RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms